RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 SENP1Q9P0U3 644 aa7.11□□□□□ -1.27
RFC4-209ENST00000448497 PPARGC1AQ9UBK2 798 aaKnown RBP7.11□□□□□ -1.27
RFC4-209ENST00000448497 AFF4Q9UHB7 1163 aaKnown RBP7.11□□□□□ -1.27
RFC4-209ENST00000448497 XPO7Q9UIA9 1087 aaKnown RBP7.11□□□□□ -1.27
RFC4-209ENST00000448497 TRHDEQ9UKU6 1024 aa7.11□□□□□ -1.27
RFC4-209ENST00000448497 TEX264Q9Y6I9 313 aa7.11□□□□□ -1.27
RFC4-209ENST00000448497 IGLV3-10A0A075B6K4 115 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TCRBV7S3A2A0A539 114 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TRDMT1O14717 391 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 CACNG3O60359 315 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 PAGE1O75459 146 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 SUN1O94901 812 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 HSPA8P11142 646 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 CPB1P15086 417 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 VAV1P15498 845 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 CCNCP24863 283 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 PPM1AP35813 382 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 MDH1P40925 334 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 GARSP41250 739 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 SCTRP47872 440 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 PPP3CCP48454 512 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TUBP50607 506 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 IRAK1P51617 712 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 MAGOHP61326 146 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 BASP1P80723 227 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 SARNPP82979 210 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 COG7P83436 770 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 WASHC5Q12768 1159 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 PSMD5Q16401 504 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 DDR2Q16832 855 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 KCTD19Q17RG1 926 aaPredicted RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 LRRC26Q2I0M4 334 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 KLHL38Q2WGJ6 581 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 DNAJC21Q5F1R6 531 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 FNBP1LQ5T0N5 605 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 UBAP2Q5T6F2 1119 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 AFMIDQ63HM1 303 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 ZNF449Q6P9G9 518 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 ARHGEF18Q6ZSZ5 1173 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TAS1R1Q7RTX1 841 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 NECAB2Q7Z6G3 386 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 DEFB128Q7Z7B8 93 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TADA2BQ86TJ2 420 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 DDX53Q86TM3 631 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 CAND1Q86VP6 1230 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 CEP57Q86XR8 500 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 CCNJLQ8IV13 435 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 ZBED8Q8IZ13 594 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 ZNF683Q8IZ20 524 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TMEM199Q8N511 208 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 ZNF461Q8TAF7 563 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 ZSCAN18Q8TBC5 510 aaPredicted RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 CCDC110Q8TBZ0 833 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 EPS8L3Q8TE67 593 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 DIS3LQ8TF46 1054 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 PYROXD1Q8WU10 500 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 MAML1Q92585 1016 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 FBXO32Q969P5 355 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 AZIN2Q96A70 460 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TBC1D31Q96DN5 1066 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 P2RY11Q96G91 374 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 TRMT2BQ96GJ1 504 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 FCRL2Q96LA5 508 aaPredicted RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 C9orf72Q96LT7 481 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 PWWP2AQ96N64 755 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 ZNF558Q96NG5 402 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 PPP1R2P1Q96PQ5 205 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 WDR83Q9BRX9 315 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 NAT9Q9BTE0 207 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 VN1R3Q9BXE9 311 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 CATSPERBQ9H7T0 1116 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 OSER1Q9NX31 292 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 NOVA2Q9UNW9 492 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 ATP11BQ9Y2G3 1177 aa7.1□□□□□ -1.27
RFC4-209ENST00000448497 HBS1LQ9Y450 684 aaKnown RBP7.1□□□□□ -1.27
RFC4-209ENST00000448497 MIA3Q5JRA6 1907 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 SYNJ2BP-COX16A0A087WUM0 186 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 EXOC1LA0A1B0GW35 172 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 WDR27A2RRH5 827 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 TRIM43BA6NCK2 446 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 SLC38A8A6NNN8 435 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 AP3B1O00203 1094 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 RNF103O00237 685 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 PSMD3O43242 534 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 METTL18O95568 372 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 RHOQP17081 205 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 ATF6P18850 670 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 GCAP28676 217 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 EPHB2P29323 1055 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 IFNAR2P48551 515 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 LMAN1P49257 510 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 GPR15P49685 360 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 PGFP49763 221 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 NDST2P52849 883 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 TBX4P57082 545 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 GPX6P59796 221 aa7.09□□□□□ -1.27
RFC4-209ENST00000448497 WDR5P61964 334 aaKnown RBP7.09□□□□□ -1.27
RFC4-209ENST00000448497 IFI35P80217 286 aaPredicted RBP7.09□□□□□ -1.27
RFC4-209ENST00000448497 HTRA4P83105 476 aaPredicted RBP7.09□□□□□ -1.27
RFC4-209ENST00000448497 CREMQ03060 361 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms