RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZFYVE27Q5T4F4 411 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 EGFLAMQ63HQ2 1017 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 TMEM198Q66K66 360 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 TPGS2Q68CL5 300 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 TXNDC8Q6A555 127 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 HIST2H2BDQ6DRA6 164 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 DENND5AQ6IQ26 1287 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 MIS18BP1Q6P0N0 1132 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 C6orf15Q6UXA7 325 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 CLEC14AQ86T13 490 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 SGMS1Q86VZ5 419 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 LINC00482Q8N8I6 264 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 CNNM3Q8NE01 707 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 IPO4Q8TEX9 1081 aaKnown RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 OSCP1Q8WVF1 389 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 CPLX3Q8WVH0 158 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 BTN2A2Q8WVV5 523 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 MRGPRX1Q96LB2 322 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 MXRA8Q9BRK3 442 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 AGO4Q9HCK5 861 aaKnown RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 TDP1Q9NUW8 608 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 MARCH2Q9P0N8 246 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 AFF4Q9UHB7 1163 aaKnown RBP5.38□□□□□ -1.55
SDCBP-205ENST00000447267 PHTF1Q9UMS5 762 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 TNNQ9UQP3 1299 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 NFE2L3Q9Y4A8 694 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 COL6A5A8TX70 2615 aa5.38□□□□□ -1.55
SDCBP-205ENST00000447267 JMJD1CQ15652 2540 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 TCP11X1B4DZS4 312 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 KLRF2D3W0D1 207 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 PTGESO14684 152 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 FGRP09769 529 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 OR4Q2P0C623 313 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 SRGAP2CP0DJJ0 459 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 ATF4P18848 351 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 ATP5JP18859 108 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 FPR2P25090 351 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 NMT1P30419 496 aaKnown RBP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 AVPR1AP37288 418 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 RPL10AP62906 217 aaKnown RBP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 ASIC1P78348 528 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 MTF1Q14872 753 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 SLC9A5Q14940 896 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 NOLC1Q14978 699 aaKnown RBP eCLIP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 UBE2SQ16763 222 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 CTXN3Q4LDR2 81 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 GDF7Q7Z4P5 450 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 C14orf80Q86SX3 495 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 STK32CQ86UX6 486 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 FAM124AQ86V42 546 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 ZNF761Q86XN6 746 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 ARL14Q8N4G2 192 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 TTC9BQ8N6N2 239 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 TEX19Q8NA77 164 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 CADM4Q8NFZ8 388 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 OTUD7AQ8TE49 926 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 CUL5Q93034 780 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 ATP2A3Q93084 1043 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 C5orf34Q96MH7 638 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 CYP2S1Q96SQ9 504 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 PNKPQ96T60 521 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 ELF4Q99607 663 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 LNPKQ9C0E8 428 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 C6orf106Q9H6K1 298 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-205ENST00000447267 KAT14Q9H8E8 782 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 CD248Q9HCU0 757 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 TUBD1Q9UJT1 453 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 DAAM1Q9Y4D1 1078 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 MYO16Q9Y6X6 1858 aa5.37□□□□□ -1.55
SDCBP-205ENST00000447267 MYMKA6NI61 221 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 PRSS44E7EML9 344 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 TRIM38O00635 465 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 NPTXRO95502 500 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 APODP05090 189 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 CD1EP15812 388 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 ALDH1A3P47895 512 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 CLCNKBP51801 687 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 ART1P52961 327 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 PLD1Q13393 1074 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 NAB2Q15742 525 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 PRSS53Q2L4Q9 553 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 MTERF2Q49AM1 385 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 LACTB2Q53H82 288 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-205ENST00000447267 ERICH6BQ5W0A0 696 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 ZNF410Q86VK4 478 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 ZNF227Q86WZ6 799 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 Q8N1Y9 231 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 NDRG1Q92597 394 aaKnown RBP5.36□□□□□ -1.55
SDCBP-205ENST00000447267 ZBTB8AQ96BR9 441 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 SMR3AQ99954 134 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 PRDM8Q9NQV8 689 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 NRBP2Q9NSY0 501 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 TP53TG5Q9Y2B4 290 aa5.36□□□□□ -1.55
SDCBP-205ENST00000447267 ACANP16112 2415 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 CEP192Q8TEP8 1941 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 PLXND1Q9Y4D7 1925 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 TRBV23OR9-2A0A075B6M9 112 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 TBC1D3BA6NDS4 549 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 WASH3PC4AMC7 463 aa5.35□□□□□ -1.55
SDCBP-205ENST00000447267 C22orf46C9J442 243 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms