RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ITIH5Q86UX2 942 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 PROSER1Q86XN7 944 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 CBWD2Q8IUF1 395 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 CSGALNACT2Q8N6G5 542 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 KIAA0895Q8NCT3 520 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 SPATA20Q8TB22 786 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 HPS3Q969F9 1004 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 CGRRF1Q99675 332 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 ZCWPW1Q9H0M4 648 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 IKZF4Q9H2S9 585 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 KCTD10Q9H3F6 313 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 ING1Q9UK53 422 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 DUSP12Q9UNI6 340 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
SMARCE1-206ENST00000447024 GOLGA8IPA6NC78 632 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 GOLGA8JA6NMD2 632 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 GABRDO14764 452 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 CCL16O15467 120 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 N4BP1O75113 896 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 TACC1O75410 805 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 SEC24AO95486 1093 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 CNOT4O95628 575 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 RHOP08100 348 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 TNNI1P19237 187 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 CYP2J2P51589 502 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 GFRA1P56159 465 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 ARPP19P56211 112 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 EDRF1Q3B7T1 1238 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 PHF19Q5T6S3 580 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 WSCD1Q658N2 575 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 FOXR2Q6PJQ5 311 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 PDZD4Q76G19 769 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 TRAPPC11Q7Z392 1133 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 SUGP1Q8IWZ8 645 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 NELFCDQ8IXH7 590 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 GRAMD1CQ8IYS0 662 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 ENGASEQ8NFI3 743 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 PARD3BQ8TEW8 1205 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 TAF4BQ92750 862 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 FGF13Q92913 245 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 SYAP1Q96A49 352 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 E2F7Q96AV8 911 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 FUBP3Q96I24 572 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 HPDLQ96IR7 371 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 FAXDC2Q96IV6 333 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 MYADMQ96S97 322 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 MTMR12Q9C0I1 747 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 GOLPH3LQ9H4A5 285 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 SMOC1Q9H4F8 434 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 ASAH2Q9NR71 780 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 SLC2A4RGQ9NR83 387 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 CHMP5Q9NZZ3 219 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 DNMT3BQ9UBC3 853 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 ASH2LQ9UBL3 628 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 WNT16Q9UBV4 365 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 SIX4Q9UIU6 781 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 CDH22Q9UJ99 828 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 MRPS23Q9Y3D9 190 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 YIPF1Q9Y548 306 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 F5P12259 2224 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 NOTCH4Q99466 2003 aa8.27□□□□□ -1.09
SMARCE1-206ENST00000447024 MTMR11A4FU01 709 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 CLIC2O15247 247 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 ECI2O75521 394 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 KLHL18O94889 574 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 NR3C1P04150 777 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 KRT19P08727 400 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 DLATP10515 647 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 P4HA1P13674 534 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 WARSP23381 471 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 CASP1P29466 404 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 GTF2H1P32780 548 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 ANP32AP39687 249 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 MAGEA11P43364 429 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 CLCN5P51795 746 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 RPL10AP62906 217 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 PFKPQ01813 784 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 TWF1Q12792 350 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 BFSP1Q12934 665 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 TRPC3Q13507 836 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 HTR4Q13639 388 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 VEPH1Q14D04 833 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 CFAP221Q4G0U5 840 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 C4orf50Q6ZRC1 276 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 INTS8Q75QN2 995 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 GET4Q7L5D6 327 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 ADGRF2Q8IZF7 708 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 PDCL2Q8N4E4 241 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 SLC44A3Q8N4M1 653 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 TMEM145Q8NBT3 493 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 ZSWIM2Q8NEG5 633 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 NOC3LQ8WTT2 800 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 PSMG2Q969U7 264 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 FAM124BQ9H5Z6 455 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 TRPV4Q9HBA0 871 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 CDH9Q9ULB4 789 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 L1RE1Q9UN81 338 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 SNX9Q9Y5X1 595 aa8.26□□□□□ -1.09
SMARCE1-206ENST00000447024 TSC2P49815 1807 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms