RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ITGA8P53708 1063 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 SOX4Q06945 474 aaPredicted RBP13.41□□□□□ -0.26
DDX56-206ENST00000446987 SMUG1Q53HV7 270 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 GLRA4Q5JXX5 417 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 COLGALT2Q8IYK4 626 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 CCDC89Q8N998 374 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 ANKK1Q8NFD2 765 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 CDX2Q99626 313 aaPredicted RBP13.41□□□□□ -0.26
DDX56-206ENST00000446987 MSTO1Q9BUK6 570 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 TSSK1BQ9BXA7 367 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 GRIP2Q9C0E4 1043 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 MANSC1Q9H8J5 431 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 VPS45Q9NRW7 570 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 MARCH5Q9NX47 278 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 CNTN3Q9P232 1028 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 ASIC3Q9UHC3 531 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 GNPTGQ9UJJ9 305 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 B3GNT3Q9Y2A9 372 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 FOXO6A8MYZ6 492 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 FAM47E-STBD1D6RA91 191 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 H3BNC9 293 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 USP1O94782 785 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 ITGB1P05556 798 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 FAM58BPP0C7Q3 252 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 CHRNB2P17787 502 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 SLC9A1P19634 815 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 CDH3P22223 829 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 IGFBP6P24592 240 aaPredicted RBP13.4□□□□□ -0.26
DDX56-206ENST00000446987 SOX5P35711 763 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 CCR3P51677 355 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 BCAR1P56945 870 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 BTKQ06187 659 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 SPCS2Q15005 226 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 TLR1Q15399 786 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 ARL13BQ3SXY8 428 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 KCNT2Q6UVM3 1135 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 HACE1Q8IYU2 909 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 SLC39A11Q8N1S5 342 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 MYLIPQ8WY64 445 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 NSMCE3Q96MG7 304 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 SAMD11Q96NU1 681 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 CYTH2Q99418 400 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 PAAF1Q9BRP4 392 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 GPATCH1Q9BRR8 931 aaKnown RBP13.4□□□□□ -0.26
DDX56-206ENST00000446987 OSBPL10Q9BXB5 764 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 TMEM206Q9H813 350 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 CLK4Q9HAZ1 481 aaKnown RBP13.4□□□□□ -0.26
DDX56-206ENST00000446987 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 DCTN4Q9UJW0 460 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 DTNAQ9Y4J8 743 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 MAD1L1Q9Y6D9 718 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 A0A0G2JND7 137 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 GRM6O15303 877 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 DNAJA2O60884 412 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 ZC3H11AO75152 810 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX56-206ENST00000446987 EFEMP2O95967 443 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
DDX56-206ENST00000446987 GALTP07902 379 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 LAG3P18627 525 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 GARTP22102 1010 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 PMLP29590 882 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 ACOT2P49753 483 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 C16orf72Q14CZ0 275 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 KNOP1Q1ED39 458 aaKnown RBP13.4□□□□□ -0.26
DDX56-206ENST00000446987 ELMSAN1Q6PJG2 1045 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 ZCCHC9Q8N567 271 aaKnown RBP13.4□□□□□ -0.26
DDX56-206ENST00000446987 URGCPQ8TCY9 931 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 ADAMTS6Q9UKP5 1117 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 AGO2Q9UKV8 859 aaKnown RBP13.4□□□□□ -0.26
DDX56-206ENST00000446987 SOX13Q9UN79 622 aa13.4□□□□□ -0.26
DDX56-206ENST00000446987 SMIM28A0A1B0GU29 152 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 H3BRJ5 948 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
DDX56-206ENST00000446987 NDUFB5O43674 189 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 KCNE1P15382 129 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 PEX2P28328 305 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 ENTPD1P49961 510 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
DDX56-206ENST00000446987 PRKD1Q15139 912 aaPredicted RBP13.39□□□□□ -0.27
DDX56-206ENST00000446987 CCDC142Q17RM4 750 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 STXBP4Q6ZWJ1 553 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 POMGNT1Q8WZA1 660 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 ACAP3Q96P50 834 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 THTPAQ9BU02 230 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 GOLGA2P5Q9HBQ8 144 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 ATAD3AQ9NVI7 634 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 PSMC3IPQ9P2W1 217 aaPredicted RBP13.39□□□□□ -0.27
DDX56-206ENST00000446987 RWDD3Q9Y3V2 267 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 SPTBN5Q9NRC6 3674 aaKnown RBP13.39□□□□□ -0.27
DDX56-206ENST00000446987 TSC2P49815 1807 aa13.39□□□□□ -0.27
DDX56-206ENST00000446987 XIRP2A4UGR9 3374 aa13.38□□□□□ -0.27
DDX56-206ENST00000446987 TMEM114B3SHH9 223 aa13.38□□□□□ -0.27
DDX56-206ENST00000446987 SPTLC1O15269 473 aa13.38□□□□□ -0.27
DDX56-206ENST00000446987 RB1P06400 928 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms