RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 C10orf82Q8WW14 230 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 NTAN1Q96AB6 310 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 SUSD3Q96L08 255 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 CAPNS2Q96L46 248 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 MLPHQ9BV36 600 aaPredicted RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 USH1CQ9Y6N9 552 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 TTC24A2A3L6 582 aaPredicted RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 RASSF9O75901 435 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 KRT16P08779 473 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 EFEMP1Q12805 493 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 SCD5Q86SK9 330 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 ZNF598Q86UK7 904 aaKnown RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 LRRC39Q96DD0 335 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 SEPT5Q99719 369 aaPredicted RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 PNPLA8Q9NP80 782 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 SRRDQ9UH36 339 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 M0QZQ0 153 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 TRDMT1O14717 391 aaKnown RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 PMPCBO75439 489 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 F9P00740 461 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 TSHRP16473 764 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 SLC18A2Q05940 514 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 DLG2Q15700 870 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 PCSK7Q16549 785 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 CES4AQ5XG92 561 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 PACS1Q6VY07 963 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 NUDCD3Q8IVD9 361 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 CDKL2Q92772 493 aa17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 ZNF419Q96HQ0 510 aaPredicted RBP17.2■□□□□ 0.34
LAPTM4B-201ENST00000445593 INHAP05111 366 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 ELF3P78545 371 aaPredicted RBP17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 BST1Q10588 318 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 BNIP1Q12981 228 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 POU6F1Q14863 301 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 SLC24A5Q71RS6 500 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 GRAMD1AQ96CP6 724 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 SLC9A7Q96T83 725 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 ARMCX1Q9P291 453 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 A0A1W2PQ45 241 aaPredicted RBP17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 A0A1W2PQY0 241 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 IRAK2O43187 625 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 UPP2O95045 317 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 CPB1P15086 417 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 PGAM1P18669 254 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 ALDH3A1P30838 453 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 TUBP50607 506 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 ATN1P54259 1190 aaPredicted RBP17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 PPIDQ08752 370 aaKnown RBP17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 C4orf22Q6V702 233 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 TTC7BQ86TV6 843 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 CIR1Q86X95 450 aaPredicted RBP17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 ARID3BQ8IVW6 561 aaPredicted RBP17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 PARP9Q8IXQ6 854 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 ATPAF2Q8N5M1 289 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 DBF4BQ8NFT6 615 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 BFARQ9NZS9 450 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 PLLPQ9Y342 182 aa17.19■□□□□ 0.34
LAPTM4B-201ENST00000445593 LYPLA1O75608 230 aaPredicted RBP17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 ALDOAP04075 364 aaKnown RBP17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 POLBP06746 335 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 CTXN3Q4LDR2 81 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 RNF43Q68DV7 783 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 PM20D1Q6GTS8 502 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 CNTD1Q8N815 330 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 PKMYT1Q99640 499 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 MOCS1Q9NZB8 636 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 GMIPQ9P107 970 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 HEY2Q9UBP5 337 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 ZFP69BQ9UJL9 534 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 DNAJC8O75937 253 aaPredicted RBP17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 ALADP13716 330 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 SERPINB3P29508 390 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 SERPINB6P35237 376 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 SCAPQ12770 1279 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 MGAT5BQ3V5L5 792 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 TEX44Q53QW1 395 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 VARS2Q5ST30 1063 aaKnown RBP17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 C4orf50Q6ZRC1 276 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 MOCOSQ96EN8 888 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 CERS2Q96G23 380 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 TRIM55Q9BYV6 548 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 GPR62Q9BZJ7 368 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 KANSL3Q9P2N6 904 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 DSEQ9UL01 958 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 CYP11A1P05108 521 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 MYL2P10916 166 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 TYK2P29597 1187 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 MAXP61244 160 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 ITKQ08881 620 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 NOGQ13253 232 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 GALNTL6Q49A17 601 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 N4BP2L1Q5TBK1 243 aaPredicted RBP17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 URGCPQ8TCY9 931 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 AGR3Q8TD06 166 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 ATP2A3Q93084 1043 aa17.18■□□□□ 0.34
LAPTM4B-201ENST00000445593 TMEM120AQ9BXJ8 343 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms