RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 E4F1Q66K89 784 aaPredicted RBP19.17■□□□□ 0.66
CCDC188-202ENST00000444532 LRSAM1Q6UWE0 723 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 ZNF571Q7Z3V5 609 aaPredicted RBP19.17■□□□□ 0.66
CCDC188-202ENST00000444532 ALG14Q96F25 216 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 TSPY26PQ9H489 355 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 TAS2R14Q9NYV8 317 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 BZW2Q9Y6E2 419 aaKnown RBP19.17■□□□□ 0.66
CCDC188-202ENST00000444532 ITIH6Q6UXX5 1313 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 DOCK4Q8N1I0 1966 aa19.17■□□□□ 0.66
CCDC188-202ENST00000444532 TARSL2A2RTX5 802 aaKnown RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 NDUFS2O75306 463 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 CNTN5O94779 1100 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 IGLV3-19P01714 112 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 RRM1P23921 792 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 CD6P30203 668 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 CTSOP43234 321 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 VASPP50552 380 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 TPMTP51580 245 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 ZNF143P52747 638 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 NRG1Q02297 640 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 ZBTB16Q05516 673 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 NFKBIBQ15653 356 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 CCDC6Q16204 474 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 ALFQ53S48 1182 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 PPP1R15BQ5SWA1 713 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 SETD3Q86TU7 594 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 C12orf50Q8NA57 414 aaPredicted RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 FAM172AQ8WUF8 416 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 OSBPL2Q9H1P3 480 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 PPARGC1AQ9UBK2 798 aaKnown RBP19.16■□□□□ 0.66
CCDC188-202ENST00000444532 CAPN11Q9UMQ6 739 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 OR51B4Q9Y5P0 310 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 SNX10Q9Y5X0 201 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 DMXL1Q9Y485 3027 aa19.16■□□□□ 0.66
CCDC188-202ENST00000444532 SPTBN4Q9H254 2564 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 EDDM13A0A1B0GTR0 161 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 TMCO5BA8MYB1 307 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 SRGAP2O75044 1071 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 SKILP12757 684 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 PTGER3P43115 390 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 HDAC4P56524 1084 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RPL7AP62424 266 aaKnown RBP19.15■□□□□ 0.66
CCDC188-202ENST00000444532 ZBED6P86452 979 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 SF3A2Q15428 464 aaKnown RBP19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RSPO4Q2I0M5 234 aaPredicted RBP19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RAB6CQ53S08 254 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 ARTNQ5T4W7 220 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 LYSMD4Q5XG99 296 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 DCUN1D2Q6PH85 259 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 SYT12Q8IV01 421 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 OR52K2Q8NGK3 314 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 PIGKQ92643 395 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RMDN1Q96DB5 314 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 ZNF419Q96HQ0 510 aaPredicted RBP19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RPL10LQ96L21 214 aaKnown RBP19.15■□□□□ 0.66
CCDC188-202ENST00000444532 MCEEQ96PE7 176 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RAB6CQ9H0N0 254 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RSPH9Q9H1X1 276 aaPredicted RBP19.15■□□□□ 0.66
CCDC188-202ENST00000444532 RETREG1Q9H6L5 497 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 CD93Q9NPY3 652 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 PARVAQ9NVD7 372 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 WSB2Q9NYS7 404 aaPredicted RBP19.15■□□□□ 0.66
CCDC188-202ENST00000444532 OR12D3Q9UGF7 316 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 SLCO3A1Q9UIG8 710 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 VPS28Q9UK41 221 aa19.15■□□□□ 0.66
CCDC188-202ENST00000444532 DDX3XO00571 662 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 RNASEH1O60930 286 aaKnown RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 RTN2O75298 545 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 FTLP02792 175 aaPredicted RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 RHOCP08134 193 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 DESP17661 470 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 HOXD12P35452 270 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 RPS14P62263 151 aaKnown RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 ZNF33AQ06730 810 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 AASDHQ4L235 1098 aaPredicted RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 C6orf118Q5T5N4 469 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 C9orf64Q5T6V5 341 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 ZNF776Q68DI1 518 aaPredicted RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 ARMCX6Q7L4S7 300 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 NETO1Q8TDF5 533 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 FOXJ1Q92949 421 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 NTAN1Q96AB6 310 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 TOE1Q96GM8 510 aaKnown RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 CNPY3Q9BT09 278 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 ZYG11BQ9C0D3 744 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 XPO4Q9C0E2 1151 aaKnown RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 MUC3BQ9H195 1237 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 DLL3Q9NYJ7 618 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 MPP6Q9NZW5 540 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 SLC25A13Q9UJS0 675 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 CDV3Q9UKY7 258 aaKnown RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 SCML1Q9UN30 329 aa19.14■□□□□ 0.65
CCDC188-202ENST00000444532 LUC7L2Q9Y383 392 aaKnown RBP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCDC188-202ENST00000444532 TTC34A8MYJ7 566 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 KHNYNO15037 678 aaKnown RBP19.13■□□□□ 0.65
CCDC188-202ENST00000444532 CBFA2T2O43439 604 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 SIN3BO75182 1162 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 DNTTP04053 509 aa19.13■□□□□ 0.65
CCDC188-202ENST00000444532 OR1E1P30953 314 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms