RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 LRRC31Q6UY01 552 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 TRIM72Q6ZMU5 477 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 C14orf80Q86SX3 495 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 ZCCHC9Q8N567 271 aaKnown RBP20.68■□□□□ 0.9
LRCH3-208ENST00000443727 DNASE2BQ8WZ79 361 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 NT5C3BQ969T7 300 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 PGAP3Q96FM1 320 aaPredicted RBP20.68■□□□□ 0.9
LRCH3-208ENST00000443727 PABPC3Q9H361 631 aaKnown RBP20.68■□□□□ 0.9
LRCH3-208ENST00000443727 ARHGEF38Q9NXL2 777 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 TMEM63CQ9P1W3 806 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 VPS28Q9UK41 221 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 SCML1Q9UN30 329 aa20.68■□□□□ 0.9
LRCH3-208ENST00000443727 OPHN1O60890 802 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 SEMA4FO95754 770 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 CHRNB2P17787 502 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 PI4KAP42356 2102 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 IRAK1P51617 712 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 CDH4P55283 916 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 FMO1Q01740 532 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 NCAPHQ15003 741 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 C9orf64Q5T6V5 341 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 CXorf57Q6NSI4 855 aaKnown RBP20.67■□□□□ 0.9
LRCH3-208ENST00000443727 PHLDB2Q86SQ0 1253 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 MMAAQ8IVH4 418 aaKnown RBP20.67■□□□□ 0.9
LRCH3-208ENST00000443727 MINDY1Q8N5J2 469 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 SLC30A5Q8TAD4 765 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 CFAP57Q96MR6 1250 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 C11orf70Q9BRQ4 267 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 ADAM33Q9BZ11 813 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 MUC3BQ9H195 1237 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 SLC32A1Q9H598 525 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 C6orf106Q9H6K1 298 aaPredicted RBP20.67■□□□□ 0.9
LRCH3-208ENST00000443727 SGK2Q9HBY8 427 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 METTL5Q9NRN9 209 aaKnown RBP20.67■□□□□ 0.9
LRCH3-208ENST00000443727 SEPT11Q9NVA2 429 aaKnown RBP20.67■□□□□ 0.9
LRCH3-208ENST00000443727 FBXL12Q9NXK8 326 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 EIF2B4Q9UI10 523 aaKnown RBP20.67■□□□□ 0.9
LRCH3-208ENST00000443727 SLC25A13Q9UJS0 675 aa20.67■□□□□ 0.9
LRCH3-208ENST00000443727 LRRC10BA6NIK2 292 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 BCAT2O15382 392 aaPredicted RBP20.66■□□□□ 0.9
LRCH3-208ENST00000443727 CYP1A1P04798 512 aaPredicted RBP20.66■□□□□ 0.9
LRCH3-208ENST00000443727 RDXP35241 583 aaKnown RBP20.66■□□□□ 0.9
LRCH3-208ENST00000443727 NSFP46459 744 aaKnown RBP20.66■□□□□ 0.9
LRCH3-208ENST00000443727 PLK1P53350 603 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 CST6Q15828 149 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 ACCSLQ4AC99 568 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 ACBD5Q5T8D3 534 aaPredicted RBP20.66■□□□□ 0.9
LRCH3-208ENST00000443727 CAVIN1Q6NZI2 390 aaKnown RBP20.66■□□□□ 0.9
LRCH3-208ENST00000443727 OR2I1PQ8NGU4 316 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 ERGIC2Q96RQ1 377 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 OMDQ99983 421 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 FEM1AQ9BSK4 669 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 TMEM59LQ9UK28 342 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 SNX10Q9Y5X0 201 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 ITIH6Q6UXX5 1313 aa20.66■□□□□ 0.9
LRCH3-208ENST00000443727 FAM47DPA6NHR8 397 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 GIPC1O14908 333 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 MID1O15344 667 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 RNASEH2AO75792 299 aaKnown RBP20.65■□□□□ 0.9
LRCH3-208ENST00000443727 FSBPO95073 299 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 C7P10643 843 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 ATP1A3P13637 1013 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 CSRP1P21291 193 aaKnown RBP20.65■□□□□ 0.9
LRCH3-208ENST00000443727 MMP8P22894 467 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 PSMD8P48556 350 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 ATP11AP98196 1134 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 USP30Q70CQ3 517 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 ARCQ7LC44 396 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 STK40Q8N2I9 435 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 EMC1Q8N766 993 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 DEFB124Q8NES8 71 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 C1orf74Q96LT6 269 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 ANLNQ9NQW6 1124 aa20.65■□□□□ 0.9
LRCH3-208ENST00000443727 SMTNL1A8MU46 457 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 SRGAP2O75044 1071 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 CNTN5O94779 1100 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 RHOCP08134 193 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 CEACAM1P13688 526 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 SDC4P31431 198 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 SLC8A1P32418 973 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 GRIK2Q13002 908 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 C5orf22Q49AR2 442 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 TRNP1Q6NT89 227 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 FAM131BQ86XD5 332 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 ZDHHC5Q9C0B5 715 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 HSD3B7Q9H2F3 369 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 TMPRSS4Q9NRS4 437 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 ADAM22Q9P0K1 906 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 TBC1D30Q9Y2I9 924 aa20.64■□□□□ 0.89
LRCH3-208ENST00000443727 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.64■□□□□ 0.89
LRCH3-208ENST00000443727 A0A1W2PP55 124 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 ADH1BP00325 375 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 IL1BP01584 269 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 CCDC172P0C7W6 258 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 KRT83P78385 493 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 ZNF252P-AS1Q0IIN9 211 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 ELAVL3Q14576 367 aaKnown RBP20.63■□□□□ 0.89
LRCH3-208ENST00000443727 CDO1Q16878 200 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 ALFQ53S48 1182 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 TFAP2DQ7Z6R9 452 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms