RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TRIM65Q6PJ69 517 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 GALNT15Q8N3T1 639 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 ZCCHC9Q8N567 271 aaKnown RBP8.03□□□□□ -1.12
CD44-211ENST00000442151 ANKRD20A12PQ8NF67 263 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 OR2T34Q8NGX1 318 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 RHBDD1Q8TEB9 315 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 ADAMTS14Q8WXS8 1223 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 SORCS1Q8WY21 1168 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 OR8D1Q8WZ84 308 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 IGSF8Q969P0 613 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 SCNM1Q9BWG6 230 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 ACE2Q9BYF1 805 aaPredicted RBP8.03□□□□□ -1.12
CD44-211ENST00000442151 SLC6A17Q9H1V8 727 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 RETREG1Q9H6L5 497 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 FBXL12Q9NXK8 326 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 ADAMTS1Q9UHI8 967 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 CLEC4EQ9ULY5 219 aa8.03□□□□□ -1.12
CD44-211ENST00000442151 CEP192Q8TEP8 1941 aa8.02□□□□□ -1.12
CD44-211ENST00000442151 EPG5Q9HCE0 2579 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 GOLGA6L7A0A1B0GV03 622 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 KCNJ18B7U540 433 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 E5RJQ4 531 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 E9PAM4 449 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 ALOX15BO15296 676 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 SH3BP5O60239 455 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 CLDN11O75508 207 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 FSBPO95073 299 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 HLA-EP13747 358 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 ZNF18P17022 549 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 SLC8A1P32418 973 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 CD70P32970 193 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 GRK6P43250 576 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 CCT8P50990 548 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 SLC6A3Q01959 620 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 PDCLQ13371 301 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 CST6Q15828 149 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 HLA-BQ31612 363 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 VWA3BQ502W6 1294 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 ZC3H12AQ5D1E8 599 aaKnown RBP8.02□□□□□ -1.13
CD44-211ENST00000442151 RAP1GAP2Q684P5 730 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 BLOC1S3Q6QNY0 202 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 TAC4Q86UU9 113 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 FAM124AQ86V42 546 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 ZNF397Q8NF99 534 aaPredicted RBP8.02□□□□□ -1.13
CD44-211ENST00000442151 FAM174AQ8TBP5 190 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 SHC3Q92529 594 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 KAT5Q92993 513 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 WDCPQ9H6R7 721 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 DDIT4Q9NX09 232 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.02□□□□□ -1.13
CD44-211ENST00000442151 ANKRD6Q9Y2G4 727 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.02□□□□□ -1.13
CD44-211ENST00000442151 ITIH6Q6UXX5 1313 aa8.02□□□□□ -1.13
CD44-211ENST00000442151 SPAARA0A1B0GVQ0 90 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 PES1O00541 588 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 VILLO15195 856 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 PAPSS1O43252 624 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 MAP3K7O43318 606 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 PCDHGA12O60330 932 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 RNGTTO60942 597 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 GJB3O75712 270 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 RNASEH2AO75792 299 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 DESP17661 470 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 BMP6P22004 513 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 PON1P27169 355 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 SLC6A4P31645 630 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 CDH4P55283 916 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 RPS24P62847 133 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 SLC20A2Q08357 652 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 OVGP1Q12889 678 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ELAVL3Q14576 367 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 PTPRNQ16849 979 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 HS1BP3Q53T59 392 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 NADSYN1Q6IA69 706 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 DBX2Q6ZNG2 339 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 RAB44Q7Z6P3 723 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 ZSCAN30Q86W11 494 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ERICH1Q86X53 443 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ZNF677Q86XU0 584 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 DHX40Q8IX18 779 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 DEFB106AQ8N104 65 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 CLEC4CQ8WTT0 213 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 RPRD1AQ96P16 312 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 SLC2A13Q96QE2 648 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 SPAG5Q96R06 1193 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 ZSWIM1Q9BR11 485 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 CRACR2AQ9BSW2 395 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 NDST4Q9H3R1 872 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 TM9SF3Q9HD45 589 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 DYRK4Q9NR20 520 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 DNAJC12Q9UKB3 198 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 DMTF1Q9Y222 760 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 TNRC6BQ9UPQ9 1833 aaKnown RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 A0A1B0GVT2 93 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 A0A1W2PPC4 97 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 TNFSF14O43557 240 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 SIN3BO75182 1162 aa8.01□□□□□ -1.13
CD44-211ENST00000442151 GADD45BO75293 160 aaPredicted RBP8.01□□□□□ -1.13
CD44-211ENST00000442151 DAB1O75553 588 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms