RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 OSBPL2Q9H1P3 480 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 MRPL47Q9HD33 250 aaKnown RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 PARD6AQ9NPB6 346 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 PRSS16Q9NQE7 514 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 PPARGC1AQ9UBK2 798 aaKnown RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 CDV3Q9UKY7 258 aaKnown RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 CAPN11Q9UMQ6 739 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 TBC1D30Q9Y2I9 924 aa10.77□□□□□ -0.69
MCF2L-216ENST00000439475 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-216ENST00000439475 PIEZO1Q92508 2521 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 CKAP5Q14008 2032 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 EDDM13A0A1B0GTR0 161 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 RNF8O76064 485 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 FTLP02792 175 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 SERPING1P05155 500 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 MYBL1P10243 752 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 GNSP15586 552 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 RRM1P23921 792 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 MZF1P28698 734 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 HOXD12P35452 270 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ETFBP38117 255 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 GGCXP38435 758 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 VASPP50552 380 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF143P52747 638 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 COPAP53621 1224 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 AIF1P55008 147 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ARID5BQ14865 1188 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 HNRNPA1L2Q32P51 320 aaKnown RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 WDR45BQ5MNZ6 344 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF776Q68DI1 518 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 TRNP1Q6NT89 227 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF783Q6ZMS7 281 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF571Q7Z3V5 609 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 SLFN11Q7Z7L1 901 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 CIR1Q86X95 450 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 SYT12Q8IV01 421 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 FRMD1Q8N878 549 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF366Q8N895 744 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 CADM4Q8NFZ8 388 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 NTAN1Q96AB6 310 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 TOE1Q96GM8 510 aaKnown RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ZNF419Q96HQ0 510 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 RPL10LQ96L21 214 aaKnown RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 CCDC114Q96M63 670 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 MCEEQ96PE7 176 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 FEM1AQ9BSK4 669 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 RTKNQ9BST9 563 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 CNPY3Q9BT09 278 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 C2orf49Q9BVC5 232 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 NUSAP1Q9BXS6 441 aaKnown RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 DONSONQ9NYP3 566 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 WSB2Q9NYS7 404 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 USP36Q9P275 1121 aaKnown RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 OR12D3Q9UGF7 316 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 MBD1Q9UIS9 605 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 VPS28Q9UK41 221 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 SCINQ9Y6U3 715 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 ITIH6Q6UXX5 1313 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
MCF2L-216ENST00000439475 CEP192Q8TEP8 1941 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 PLXND1Q9Y4D7 1925 aa10.76□□□□□ -0.69
MCF2L-216ENST00000439475 NUP205Q92621 2012 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 IGLV3-10A0A075B6K4 115 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 ILVBLA1L0T0 632 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SIN3BO75182 1162 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 CNTN5O94779 1100 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 GJB6O95452 261 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SKILP12757 684 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 PBX1P40424 430 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 TPMTP51580 245 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 HDAC4P56524 1084 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 RPS14P62263 151 aaKnown RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 NRG1Q02297 640 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SLC20A2Q08357 652 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 TRIM14Q14142 442 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 CCDC6Q16204 474 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 DUOXA1Q1HG43 343 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 RSPO4Q2I0M5 234 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 ALFQ53S48 1182 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 EFHC2Q5JST6 749 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 FAM46CQ5VWP2 391 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 IL31Q6EBC2 164 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 PLEKHA7Q6IQ23 1121 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 CXorf57Q6NSI4 855 aaKnown RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 RETSATQ6NUM9 610 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 RWDD4Q6NW29 188 aaKnown RBP10.75□□□□□ -0.69
MCF2L-216ENST00000439475 ARMCX6Q7L4S7 300 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 DSG4Q86SJ6 1040 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 DEFB119Q8N690 84 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 GANCQ8TET4 914 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 MYO19Q96H55 970 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 MRGPRX3Q96LB0 322 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SYT11Q9BT88 431 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 SPON2Q9BUD6 331 aa10.75□□□□□ -0.69
MCF2L-216ENST00000439475 GPR174Q9BXC1 333 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms