RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PGS1Q32NB8 556 aa16.14■□□□□ 0.17
DHFR-201ENST00000439211 FKBP1CQ5VVH2 108 aa16.14■□□□□ 0.17
DHFR-201ENST00000439211 RWDD4Q6NW29 188 aaKnown RBP16.14■□□□□ 0.17
DHFR-201ENST00000439211 NEPROQ6NW34 567 aa16.14■□□□□ 0.17
DHFR-201ENST00000439211 USP13Q92995 863 aaPredicted RBP16.14■□□□□ 0.17
DHFR-201ENST00000439211 DHX35Q9H5Z1 703 aaKnown RBP16.14■□□□□ 0.17
DHFR-201ENST00000439211 ZNF395Q9H8N7 513 aaPredicted RBP16.14■□□□□ 0.17
DHFR-201ENST00000439211 FAM49BQ9NUQ9 324 aa16.14■□□□□ 0.17
DHFR-201ENST00000439211 PIH1D1Q9NWS0 290 aaKnown RBP16.14■□□□□ 0.17
DHFR-201ENST00000439211 PCDHGB4Q9UN71 923 aa16.14■□□□□ 0.17
DHFR-201ENST00000439211 PCDHGB5Q9Y5G0 923 aa16.14■□□□□ 0.17
DHFR-201ENST00000439211 TEX28O15482 410 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 CAPN1P07384 714 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 OSBPP22059 807 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 NME3Q13232 169 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 LY6KQ17RY6 165 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ANO4Q32M45 955 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ACSS3Q9H6R3 686 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ZNF696Q9H7X3 374 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 PCDHGA3Q9Y5H0 932 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TYROBPO43914 113 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TGDSO95455 350 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TUBA1BP68363 451 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 CCNIQ14094 377 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TUBA1AQ71U36 451 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 VASH1Q7L8A9 365 aaPredicted RBP16.13■□□□□ 0.17
DHFR-201ENST00000439211 MYO1HQ8N1T3 1032 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 SHKBP1Q8TBC3 707 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ATXN7L3BQ96GX2 97 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ZNF518BQ9C0D4 1074 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ADA2Q9NZK5 511 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 C10orf71Q711Q0 1435 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TMEM114B3SHH9 223 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 H3BNX3 289 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 SNRPAP09012 282 aaKnown RBP16.13■□□□□ 0.17
DHFR-201ENST00000439211 POLR2EP19388 210 aaKnown RBP16.13■□□□□ 0.17
DHFR-201ENST00000439211 SDC4P31431 198 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 GPX6P59796 221 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 PPM1LQ5SGD2 360 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 LRRC38Q5VT99 294 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ZSCAN18Q8TBC5 510 aaPredicted RBP16.13■□□□□ 0.17
DHFR-201ENST00000439211 CXorf21Q9HAI6 301 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 POU2F3Q9UKI9 436 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 SNX13Q9Y5W8 968 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 SQORQ9Y6N5 450 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ADAMTSL1Q8N6G6 1762 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 RNF103-CHMP3A0A140T963 221 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TCRBV9S1A1TA0A576 114 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TMEM63AO94886 807 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 H6PDO95479 791 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 NKX2-5P52952 324 aaPredicted RBP16.13■□□□□ 0.17
DHFR-201ENST00000439211 PKNOX1P55347 436 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 SESN2P58004 480 aaPredicted RBP16.13■□□□□ 0.17
DHFR-201ENST00000439211 SP2Q02086 613 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 LAMTOR4Q0VGL1 99 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 ANGEL2Q5VTE6 544 aaKnown RBP16.13■□□□□ 0.17
DHFR-201ENST00000439211 RXFP2Q8WXD0 754 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 OMA1Q96E52 524 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 PPP1R36Q96LQ0 422 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 CPXM1Q96SM3 734 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 VPS45Q9NRW7 570 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 CDC14AQ9UNH5 594 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 DNAJC16Q9Y2G8 782 aa16.13■□□□□ 0.17
DHFR-201ENST00000439211 TNPO2O14787 897 aaKnown RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 IL1R2P27930 398 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 IFNA8P32881 189 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 NSUN2Q08J23 767 aaKnown RBP eCLIP16.12■□□□□ 0.17
DHFR-201ENST00000439211 TJAP1Q5JTD0 557 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 EXOC8Q8IYI6 725 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 NKD2Q969F2 451 aaPredicted RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 ISOC1Q96CN7 298 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 MAELQ96JY0 434 aaKnown RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 POLR1BQ9H9Y6 1135 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 DENRO43583 198 aaKnown RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 GMPSP49915 693 aaPredicted RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 TPD52P55327 224 aaPredicted RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 CAMK2BQ13554 666 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 TMTC4Q5T4D3 741 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 ZFYVE19Q96K21 471 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 EBF4Q9BQW3 602 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 TRIM39Q9HCM9 518 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 KRBA1A5PL33 1030 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 ANKRD34BA5PLL1 514 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 B4GALT5O43286 388 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 DCXO43602 365 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 SERPINA6P08185 405 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 PRKACBP22694 351 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 SNAPC2Q13487 334 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 FSCBQ5H9T9 825 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 PRR23CQ6ZRP0 262 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 BBS12Q6ZW61 710 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 PTAR1Q7Z6K3 402 aaPredicted RBP16.12■□□□□ 0.17
DHFR-201ENST00000439211 TTC30AQ86WT1 665 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 FAM47BQ8NA70 645 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 SLC43A3Q8NBI5 491 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 OSCP1Q8WVF1 389 aa16.12■□□□□ 0.17
DHFR-201ENST00000439211 SPATA33Q96N06 139 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms