RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 ARHGAP15Q53QZ3 475 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 CCDC122Q5T0U0 273 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 ARMC4Q5T2S8 1044 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 RNF43Q68DV7 783 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 DENND1BQ6P3S1 775 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 SYCE2Q6PIF2 218 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 UNC5DQ6UXZ4 953 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 MMS22LQ6ZRQ5 1243 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 CLEC20AQ6ZU45 233 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 PAQR9Q6ZVX9 377 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GRASPQ7Z6J2 395 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 DNAJB7Q7Z6W7 309 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GPR149Q86SP6 731 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 C14orf80Q86SX3 495 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 PIGZQ86VD9 579 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 PASD1Q8IV76 773 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 SIX6OS1Q8N1H7 587 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 NKAIN3Q8N8D7 197 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 C2CD4AQ8NCU7 369 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 PDZD8Q8NEN9 1154 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 FAM76AQ8TAV0 307 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 BRSK1Q8TDC3 778 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 FBLIM1Q8WUP2 373 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 MRPS31Q92665 395 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 FBXO32Q969P5 355 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 PSMG2Q969U7 264 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 HSFY1Q96LI6 401 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 NECTIN4Q96NY8 510 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 MOGAT1Q96PD6 335 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 SLITRK1Q96PX8 696 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 KCNK16Q96T55 309 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 SMOQ99835 787 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 SH3GL1Q99961 368 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 TTYH3Q9C0H2 523 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 LHX5Q9H2C1 402 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 ATXN3LQ9H3M9 355 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 HAUS4Q9H6D7 363 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 CSNK1G1Q9HCP0 422 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 ACP6Q9NPH0 428 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 TCF7L2Q9NQB0 619 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 KCTD5Q9NXV2 234 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 TRPM5Q9NZQ8 1165 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 EPS15L1Q9UBC2 864 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 DNMT3BQ9UBC3 853 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 TMEM98Q9Y2Y6 226 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 TRIOBPQ9H2D6 2365 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 DNAH12Q6ZR08 3092 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 FAM95CA0A1B0GW59 222 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 C2orf81A6NN90 581 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 BEST1O76090 585 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 FBXO21O94952 628 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 LSM8O95777 96 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 RHOP08100 348 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 GSTP1P09211 210 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 MYBL2P10244 700 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 RALAP11233 206 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 LCP1P13796 627 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 GRK2P25098 689 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 GABRR2P28476 465 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 GPD2P43304 727 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 NSFP46459 744 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 PPP3CCP48454 512 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 RGS7P49802 495 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 TKTL1P51854 596 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 CACNA2D1P54289 1103 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 CSE1LP55060 971 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 HSD17B7P56937 341 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 DLX2Q07687 328 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 TBX2Q13207 712 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 SMAD4Q13485 552 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 CNGA3Q16281 694 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 NAA35Q5VZE5 725 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 OR6B2Q6IFH4 312 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 CDPF1Q6NVV7 123 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 PACS1Q6VY07 963 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 NEK10Q6ZWH5 1172 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 ZNF771Q7L3S4 317 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 BEND5Q7L4P6 421 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 SRLQ86TD4 932 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 TADA2BQ86TJ2 420 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 ERICH1Q86X53 443 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 SULF2Q8IWU5 870 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 PEX5LQ8IYB4 626 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 ARHGAP18Q8N392 663 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 Q8N3U1 123 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 STKLD1Q8NE28 680 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 ZMIZ2Q8NF64 920 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 SUN5Q8TC36 379 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 SLC20A1Q8WUM9 679 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 SLC35F5Q8WV83 523 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 KCTD13Q8WZ19 329 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 ZNF75CPQ92670 426 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 NAF1Q96HR8 494 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 MSLNLQ96KJ4 702 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 PPP1R13BQ96KQ4 1090 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 CCDC42Q96M95 316 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 YIPF2Q9BWQ6 316 aa6.42□□□□□ -1.38
ECHDC1-208ENST00000436638 AP1M1Q9BXS5 423 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms