RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 BTBD3Q9Y2F9 522 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 GSAPA4D1B5 854 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 STX16-NPEPL1H3BU86 382 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 STX16O14662 325 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 TOB2Q14106 344 aaPredicted RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF846Q147U1 533 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 FAM187BQ17R55 369 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 TIMM50Q3ZCQ8 353 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF605Q86T29 641 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 CPA6Q8N4T0 437 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 OR10H5Q8NGA6 315 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 DNAJC9Q8WXX5 260 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 TRIM51Q9BSJ1 452 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 PABPC3Q9H361 631 aaKnown RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 MCCC2Q9HCC0 563 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 PHF11Q9UIL8 331 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 LYVE1Q9Y5Y7 322 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 AGRPO00253 132 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 KCNQ2O43526 872 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 AKT2P31751 481 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 GRTP1Q5TC63 336 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF621Q6ZSS3 439 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 TFAP2DQ7Z6R9 452 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 PJA1Q8NG27 643 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 DSN1Q9H410 356 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 SNX13Q9Y5W8 968 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 BICRAQ9NZM4 1560 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 TRIM64A6NGJ6 449 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 IL1BP01584 269 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 MASP1P48740 699 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 PSEN1P49768 467 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ERFP50548 548 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 LLGL2Q6P1M3 1020 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 METTL6Q8TCB7 284 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 FIG4Q92562 907 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 POLR1EQ9GZS1 481 aaKnown RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 C3orf14Q9HBI5 128 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 C15orf38-AP3S2A0A0A6YYH1 394 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 UBDO15205 165 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 S100A3P33764 101 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 RPP38P78345 283 aaKnown RBP11.39□□□□□ -0.59
SCN4A-201ENST00000435607 CRY1Q16526 586 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 ARPINQ7Z6K5 226 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 GPSM1Q86YR5 675 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 MS4A14Q96JA4 679 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 PLA2G12BQ9BX93 195 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 SLC12A4Q9UP95 1085 aa11.39□□□□□ -0.59
SCN4A-201ENST00000435607 A0A1W2PQJ5 194 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 KDM6BO15054 1643 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 PSEN2P49810 448 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 CCNIQ14094 377 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 NDUFA9Q16795 377 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 KLHL12Q53G59 568 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 SLC27A1Q6PCB7 646 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 RASSF6Q6ZTQ3 369 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 OR8D1Q8WZ84 308 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 PPP1R37O75864 691 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 NAA20P61599 178 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
SCN4A-201ENST00000435607 MRPS35P82673 323 aaKnown RBP11.38□□□□□ -0.59
SCN4A-201ENST00000435607 RPL19P84098 196 aaKnown RBP11.38□□□□□ -0.59
SCN4A-201ENST00000435607 GPAT3Q53EU6 434 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 FAM131BQ86XD5 332 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 ELMO1Q92556 727 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 BRD9Q9H8M2 597 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 PCDHB11Q9Y5F2 797 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 UBE2QL1A1L167 161 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 DNALI1O14645 258 aaPredicted RBP11.38□□□□□ -0.59
SCN4A-201ENST00000435607 KMOO15229 486 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 CYB5AP00167 134 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 GIMD1P0DJR0 217 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 CCNA2P20248 432 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 LAMTOR4Q0VGL1 99 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 GRB14Q14449 540 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 CYB5D1Q6P9G0 228 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 COLGALT1Q8NBJ5 622 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 AGPAT3Q9NRZ7 376 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 ABCC13Q9NSE7 274 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 SETD4Q9NVD3 440 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 HECW2Q9P2P5 1572 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 GRXCR2A6NFK2 248 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 POU6F1Q14863 301 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 SPANXN3Q5MJ09 141 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 Q96MT0 163 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 FAM111AQ96PZ2 611 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 PRDM16Q9HAZ2 1276 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 SNTG2Q9NY99 539 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 MGAT5Q09328 741 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 THOC7Q6I9Y2 204 aaKnown RBP11.38□□□□□ -0.59
SCN4A-201ENST00000435607 TPGS1Q6ZTW0 290 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 NRSN1Q8IZ57 195 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 FLCNQ8NFG4 579 aa11.38□□□□□ -0.59
SCN4A-201ENST00000435607 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms