RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 GSTCDQ8NEC7 633 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 STMN2Q93045 179 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 LENG1Q96BZ8 264 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 FAM136AQ96C01 138 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SENP8Q96LD8 212 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ZFP42Q96MM3 310 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 FAM161BQ96MY7 647 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PTPN18Q99952 460 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MLPHQ9BV36 600 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TMEM30AQ9NV96 361 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 DDX43Q9NXZ2 648 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 IL1RAPL1Q9NZN1 696 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TXNDC16Q9P2K2 825 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 HHLA1C9JL84 531 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 KLHL2O95198 593 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CDC25CP30307 473 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SPRP35270 261 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 IDH3AP50213 366 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ACTR3P61158 418 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ANKRD20A4Q4UJ75 823 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TMEM86AQ8N2M4 240 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ZNF669Q96BR6 464 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SYT15Q9BQS2 421 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 RRN3Q9NYV6 651 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 BFARQ9NZS9 450 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TRHDEQ9UKU6 1024 aa16.45■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ZBTB24O43167 697 aaPredicted RBP16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 AP1G2O75843 785 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 RALBP11234 206 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MX2P20592 715 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 LHX1P48742 406 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CSRP3P50461 194 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ABCE1P61221 599 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TWF2Q6IBS0 349 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MYLK4Q86YV6 388 aaPredicted RBP16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ZSCAN18Q8TBC5 510 aaPredicted RBP16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ADAM32Q8TC27 787 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PGLYRP2Q96PD5 576 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SLC38A7Q9NVC3 462 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 FLRT1Q9NZU1 646 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SLC7A8Q9UHI5 535 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SOX13Q9UN79 622 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PTCH2Q9Y6C5 1203 aa16.44■□□□□ 0.22
HLA-DQB2-231ENST00000435145 C17orf102A2RUQ5 167 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SIN3BO75182 1162 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 USP12O75317 370 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 LTFP02788 710 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CPA3P15088 417 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CXCR3P49682 368 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CPT1AP50416 773 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CACNA2D1P54289 1103 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SESN3P58005 492 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ZBTB17Q13105 803 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MUM1Q2TAK8 710 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TRIM68Q6AZZ1 485 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 FSTL4Q6MZW2 842 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 STRA8Q7Z7C7 330 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CMC1Q7Z7K0 106 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 LMNTD2Q8IXW0 634 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PPP4R1Q8TF05 950 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PCED1BQ96HM7 432 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PANX3Q96QZ0 392 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 VAT1Q99536 393 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 FAM167BQ9BTA0 163 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 GPAMQ9HCL2 828 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PNPOQ9NVS9 261 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 APOBEC2Q9Y235 224 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PCDHB12Q9Y5F1 795 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 TRIP12Q14669 1992 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MAGEB16A2A368 324 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MYBPHLA2RUH7 354 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 F9P00740 461 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MPOP05164 745 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 GMPRP36959 345 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 NPY2RP49146 381 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 RIPOR1Q6ZS17 1223 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 PLD6Q8N2A8 252 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 AGAP3Q96P47 875 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 THTPAQ9BU02 230 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ZNF358Q9NW07 568 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 DDIT4Q9NX09 232 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 DNAJB4Q9UDY4 337 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 LRCH1Q9Y2L9 728 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SCN4AP35499 1836 aa16.43■□□□□ 0.22
HLA-DQB2-231ENST00000435145 A0A088AWK7 358 aa16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MEIS3P2A8K0S8 358 aa16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CIB2O75838 187 aa16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MYL3P08590 195 aa16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 USP17L7P0C7H9 530 aa16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 RABGGTBP53611 331 aa16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 CSE1LP55060 971 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 MRPS35P82673 323 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 ARL13BQ3SXY8 428 aa16.42■□□□□ 0.22
HLA-DQB2-231ENST00000435145 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms