RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PLAC1Q9HBJ0 212 aa12.24□□□□□ -0.45
CTCFL-209ENST00000433949 KLHL8Q9P2G9 620 aaPredicted RBP12.24□□□□□ -0.45
CTCFL-209ENST00000433949 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
CTCFL-209ENST00000433949 MRPL42Q9Y6G3 142 aaKnown RBP12.24□□□□□ -0.45
CTCFL-209ENST00000433949 CHD7Q9P2D1 2997 aa12.24□□□□□ -0.45
CTCFL-209ENST00000433949 FAM72CH0Y354 149 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 TMEM189-UBE2V1I3L0A0 370 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 AP3B1O00203 1094 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 EFCAB14O75071 495 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 RASSF9O75901 435 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 IL1BP01584 269 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 PYGBP11216 843 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 PSMB4P28070 264 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 CCNFP41002 786 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 SPDYAQ5MJ70 313 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 FAM72AQ5TYM5 149 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 FAM171A1Q5VUB5 890 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 FAM72DQ6L9T8 149 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 CASC4Q6P4E1 433 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 MARK2Q7KZI7 788 aaKnown RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 TAS1R1Q7RTX1 841 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 FAM72BQ86X60 149 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 SPATA2LQ8IUW3 424 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 CCDC33Q8N5R6 958 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 DEPDC1BQ8WUY9 529 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 CWH43Q9H720 699 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 SEPT10Q9P0V9 454 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 ADAM28Q9UKQ2 775 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 KLF11O14901 512 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 ATP5HO75947 161 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 UBOX5O94941 541 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 GJB5O95377 273 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 IGLV3-25P01717 112 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 MYOGP15173 224 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 DNAJB2P25686 324 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 EPHB2P29323 1055 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 COG7P83436 770 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 GALNT2Q10471 571 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 BNIP1Q12981 228 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 FAM109BQ6ICB4 259 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 TIFABQ6ZNK6 161 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 FAM43BQ6ZT52 329 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 MPP5Q8N3R9 675 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 ZNF276Q8N554 614 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 FITM2Q8N6M3 262 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 OR10T2Q8NGX3 314 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 ACMSDQ8TDX5 336 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 EDEM1Q92611 657 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 RNF34Q969K3 372 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 KLF6Q99612 283 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-209ENST00000433949 SLCO1B3Q9NPD5 702 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 MARCH5Q9NX47 278 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 SLC17A7Q9P2U7 560 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 NR2E3Q9Y5X4 410 aa12.23□□□□□ -0.45
CTCFL-209ENST00000433949 LCHNA4D1U4 455 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 C2CD2LO14523 706 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 TGDSO95455 350 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 AP2A1O95782 977 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 POLBP06746 335 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 PTPN3P26045 913 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 GARSP41250 739 aaKnown RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 GRIA1P42261 906 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 FAM133BQ5BKY9 247 aaKnown RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 FBXW10Q5XX13 1052 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 LZTR1Q8N653 840 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 DQX1Q8TE96 717 aaKnown RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 LRRC37BQ96QE4 947 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 HAPLN3Q96S86 360 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 TMEM209Q96SK2 561 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 SLC40A1Q9NP59 571 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 PLXNA3P51805 1871 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 WDR27A2RRH5 827 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 I6L893 689 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 IRAK2O43187 625 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 TLL1O43897 1013 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 LRIG2O94898 1065 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 OR4Q2P0C623 313 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 CSH1P0DML2 217 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 CSH2P0DML3 217 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 EIF4EBP2Q13542 120 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 SHHQ15465 462 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 DBN1Q16643 649 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 SPANXN3Q5MJ09 141 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 BTBD8Q5XKL5 378 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 OTOAQ7RTW8 1153 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 TAC4Q86UU9 113 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 LRRTM3Q86VH5 581 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 HERC6Q8IVU3 1022 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 DCP1BQ8IZD4 617 aaKnown RBP12.22□□□□□ -0.45
CTCFL-209ENST00000433949 RAB3IL1Q8TBN0 382 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 ARNTL2Q8WYA1 636 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
CTCFL-209ENST00000433949 FUBP3Q96I24 572 aaKnown RBP eCLIP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms