RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 STRNO43815 780 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 ATP9BO43861 1147 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 FYNP06241 537 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 KCNE1P15382 129 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 ADRA1BP35368 520 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 HARS2P49590 506 aaKnown RBP12.08□□□□□ -0.48
CD44-209ENST00000433892 EPHB1P54762 984 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 IRF9Q00978 393 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 IZUMO2Q6UXV1 221 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 NAPRTQ6XQN6 538 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 CTU1Q7Z7A3 348 aaKnown RBP12.08□□□□□ -0.48
CD44-209ENST00000433892 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
CD44-209ENST00000433892 AGR3Q8TD06 166 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 PYDC1Q8WXC3 89 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 APOL2Q9BQE5 337 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 DNAI2Q9GZS0 605 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 PRDM16Q9HAZ2 1276 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 DNAJC28Q9NX36 388 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 BFARQ9NZS9 450 aa12.08□□□□□ -0.48
CD44-209ENST00000433892 NRCAMQ92823 1304 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ZCWPW2A0A1B0GU75 182 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ENO4A6NNW6 628 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 YJEFN3A6XGL0 299 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 GOLGA8TH3BQL2 631 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 XPOTO43592 962 aaKnown RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 ZMPSTE24O75844 475 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 PDE5AO76074 875 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 AP2A1O95782 977 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 WARSP23381 471 aaKnown RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 SPRP35270 261 aaPredicted RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 SERPINB8P50452 374 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 CDC42EP1Q00587 391 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 SNX17Q15036 470 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 CCDC153Q494R4 210 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 GPR142Q7Z601 462 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 TMEM135Q86UB9 458 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 PHTF2Q8N3S3 785 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 NPWQ8N729 165 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ZNF781Q8N8C0 355 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ACVR1CQ8NER5 493 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 CCDC124Q96CT7 223 aaKnown RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 SLC2A13Q96QE2 648 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ULBP1Q9BZM6 244 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 VCXQ9H320 206 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ABHD16BQ9H3Z7 469 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 COG4Q9H9E3 785 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 SCOCQ9UIL1 159 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 PLXNB2O15031 1838 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 A0A096LPK6 155 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 SMIM35A0A1B0GVV1 85 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 DCXO43602 365 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ALOX15P16050 662 aaPredicted RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 TPH1P17752 444 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 CD68P34810 354 aaPredicted RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 LIMK2P53671 638 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 TPI1P60174 286 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 GRIK3Q13003 919 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ANKRD20A4Q4UJ75 823 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 XKR4Q5GH76 650 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.07□□□□□ -0.48
CD44-209ENST00000433892 OR6Y1Q8NGX8 325 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 KCTD13Q8WZ19 329 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 LENG1Q96BZ8 264 aaPredicted RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 MOCOSQ96EN8 888 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 ZFP42Q96MM3 310 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 KCNK16Q96T55 309 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 GPAMQ9HCL2 828 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 ACSS2Q9NR19 701 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 CHRAC1Q9NRG0 131 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 UBP1Q9NZI7 540 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 CPSF2Q9P2I0 782 aaKnown RBP12.07□□□□□ -0.48
CD44-209ENST00000433892 IPPQ9Y573 584 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 SNX10Q9Y5X0 201 aa12.07□□□□□ -0.48
CD44-209ENST00000433892 CCDC78A2IDD5 438 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 BTBD19C9JJ37 291 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 E9PBE3 544 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 G3V2L1 256 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 TREHO43280 583 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 KLHL41O60662 606 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 HSPA4LO95757 839 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 NCAM1P13591 858 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 AXLP30530 894 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 MAGEA12P43365 314 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 DSG1Q02413 1049 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 ZBTB17Q13105 803 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 RNF220Q5VTB9 566 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 NAIF1Q69YI7 327 aaPredicted RBP12.06□□□□□ -0.48
CD44-209ENST00000433892 OR52E8Q6IFG1 317 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 GPRIN1Q7Z2K8 1008 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 TOP6BLQ8N6T0 577 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 EFCAB3Q8N7B9 438 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 GATA6Q92908 595 aa12.06□□□□□ -0.48
CD44-209ENST00000433892 CMTM5Q96DZ9 223 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms