RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 USP29Q9HBJ7 922 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 ASIC3Q9UHC3 531 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 ZNF510Q9Y2H8 683 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 C2orf16Q68DN1 1984 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 GOLGA6L7A0A1B0GV03 622 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 GREM1O60565 184 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 SLC6A4P31645 630 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 ZXDBP98169 803 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 GALNT2Q10471 571 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 Q6ZNB5 142 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 CMTM8Q8IZV2 173 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 LGI2Q8N0V4 545 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 EFHBQ8N7U6 833 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 IGSF8Q969P0 613 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 WBP2Q969T9 261 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 FERMT1Q9BQL6 677 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 FAM129AQ9BZQ8 928 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 TRIM31Q9BZY9 425 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 DPH5Q9H2P9 285 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 MPP6Q9NZW5 540 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 NUP205Q92621 2012 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 TRIOO75962 3097 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 RBL1P28749 1068 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 AVPR1AP37288 418 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 CARSP49589 748 aaKnown RBP18.72■□□□□ 0.59
HMGN1-206ENST00000431390 GDF10P55107 478 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 NTHL1P78549 312 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 ZNF33AQ06730 810 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 ADAM15Q13444 863 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 PRKD1Q15139 912 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-206ENST00000431390 MAP9Q49MG5 647 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 RABGAP1LQ5R372 815 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 AFMIDQ63HM1 303 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 HEATR6Q6AI08 1181 aaKnown RBP18.72■□□□□ 0.59
HMGN1-206ENST00000431390 FBXO38Q6PIJ6 1188 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 HTR3DQ70Z44 454 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 KMT2EQ8IZD2 1858 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 C12orf76Q8N812 135 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-206ENST00000431390 HNRNPLLQ8WVV9 542 aaKnown RBP18.72■□□□□ 0.59
HMGN1-206ENST00000431390 IFT81Q8WYA0 676 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 HDAC11Q96DB2 347 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 C10orf88Q9H8K7 445 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 WHRNQ9P202 907 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 SNX24Q9Y343 169 aa18.72■□□□□ 0.59
HMGN1-206ENST00000431390 NUP210Q8TEM1 1887 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-206ENST00000431390 KCNN4O15554 427 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 GLP2RO95838 553 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 IFNB1P01574 187 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 IVDP26440 423 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 RPL21P46778 160 aaKnown RBP18.71■□□□□ 0.59
HMGN1-206ENST00000431390 MAPKAPK2P49137 400 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 NDST2P52849 883 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 PPIDQ08752 370 aaKnown RBP18.71■□□□□ 0.59
HMGN1-206ENST00000431390 TRADDQ15628 312 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 TRIP13Q15645 432 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-206ENST00000431390 ALFQ53S48 1182 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 TMC5Q6UXY8 1006 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 LRRC49Q8IUZ0 686 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 FAM217AQ8IXS0 508 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 UMODL1-AS1Q8N2C9 162 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 FAM71DQ8N9W8 422 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 BBOF1Q8ND07 529 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 SNF8Q96H20 258 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 ZNF212Q9UDV6 495 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 MRPS23Q9Y3D9 190 aaKnown RBP18.71■□□□□ 0.59
HMGN1-206ENST00000431390 SH3BP1Q9Y3L3 701 aa18.71■□□□□ 0.59
HMGN1-206ENST00000431390 NDC80O14777 642 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 CNTN5O94779 1100 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 TCF3P15923 654 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 ITIH2P19823 946 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 ADCY8P40145 1251 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 GARSP41250 739 aaKnown RBP18.7■□□□□ 0.58
HMGN1-206ENST00000431390 IRAK1P51617 712 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 P3H1Q32P28 736 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 TTC39BQ5VTQ0 682 aaPredicted RBP18.7■□□□□ 0.58
HMGN1-206ENST00000431390 RFWD3Q6PCD5 774 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 C4orf22Q6V702 233 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 ARHGAP12Q8IWW6 846 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 GLIS1Q8NBF1 620 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 HTR3CQ8WXA8 447 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 LRRC45Q96CN5 670 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 MSLNLQ96KJ4 702 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 LGMNQ99538 433 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 GRHL1Q9NZI5 618 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 CFAP97Q9P2B7 532 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 NFU1Q9UMS0 254 aa18.7■□□□□ 0.58
HMGN1-206ENST00000431390 E2F8A0AVK6 867 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 LEFTY2O00292 366 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 MTSS1O43312 755 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 ZSCAN5DPP0CG00 497 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 MYBL2P10244 700 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 ETS1P14921 441 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 ECHS1P30084 290 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 WEE1P30291 646 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 ACTN2P35609 894 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 CDH4P55283 916 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 AP1B1Q10567 949 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 CALCOCO2Q13137 446 aa18.69■□□□□ 0.58
HMGN1-206ENST00000431390 HLTFQ14527 1009 aaKnown RBP eCLIP18.69■□□□□ 0.58
HMGN1-206ENST00000431390 KCTD19Q17RG1 926 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms