RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 C4orf19Q8IY42 314 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 RP9Q8TA86 221 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 TRPC4APQ8TEL6 797 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 SLCO4A1Q96BD0 722 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 PPWD1Q96BP3 646 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 MRPL11Q9Y3B7 192 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 MYO18AQ92614 2054 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 A0A087WXM4 84 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 SAC3D1A6NKF1 404 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 GPR25O00155 361 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 NDUFB5O43674 189 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 TIPRLO75663 272 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 LYPLA2O95372 231 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 LTFP02788 710 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 ZNF182P17025 639 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 MYL6P60660 151 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 TRAF2Q12933 501 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 DPYSQ14117 519 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 PTK2BQ14289 1009 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 STXBP5Q5T5C0 1151 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 ANKRD26P1Q6NSI1 321 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 CHST15Q7LFX5 561 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 PLD5Q8N7P1 536 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 SCAIQ8N9R8 606 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 NPLQ9BXD5 320 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 MOCS1Q9NZB8 636 aa11.32□□□□□ -0.6
SEMA4D-209ENST00000429836 NFIBO00712 420 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 SULT1C4O75897 302 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 EPHX2P34913 555 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 NUMBP49757 651 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 SESN2P58004 480 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 SP4Q02446 784 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 RAB39AQ14964 217 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 C15orf59Q2T9L4 293 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 ZBTB49Q6ZSB9 765 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 ANKRD60Q9BZ19 345 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 NCKIPSDQ9NZQ3 722 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 VPS28Q9UK41 221 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 CNTNAP4Q9C0A0 1308 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 C9IYK1 514 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 NRP1O14786 923 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 MYCLP12524 364 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 MX2P20592 715 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 IRF9Q00978 393 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 DLG2Q15700 870 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 RGS21Q2M5E4 152 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 NHSL2Q5HYW2 709 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 LDLRAP1Q5SW96 308 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 ZC3H7AQ8IWR0 971 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 APBA2Q99767 749 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 NTPCRQ9BSD7 190 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 TCHPQ9BT92 498 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 POLR1BQ9H9Y6 1135 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 GMPR2Q9P2T1 348 aaKnown RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 PPP1R1BQ9UD71 204 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 VPS51Q9UID3 782 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 ITGB1BP2Q9UKP3 347 aa11.31□□□□□ -0.6
SEMA4D-209ENST00000429836 C1orf232A0A0U1RR37 186 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 KRBA1A5PL33 1030 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CNOT3O75175 753 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 GRAP2O75791 330 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 BAIAP3O94812 1187 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ERVK-10P10266 1014 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ARSAP15289 507 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 MAGEA3P43357 314 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 PGGT1BP53609 377 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 BCAR1P56945 870 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 STILQ15468 1287 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 NEDD8Q15843 81 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 TREML2Q5T2D2 321 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 PRR5LQ6MZQ0 368 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 GALNT18Q6P9A2 607 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 MAMDC4Q6UXC1 1216 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 GK5Q6ZS86 529 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CHSY3Q70JA7 882 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 ACMSDQ8TDX5 336 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 AGAP3Q96P47 875 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 RNF157Q96PX1 679 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 FRMD8Q9BZ67 464 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 DHX35Q9H5Z1 703 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CAB39LQ9H9S4 337 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 SMOXQ9NWM0 555 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CNOT6Q9ULM6 557 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 KCNU1A8MYU2 1149 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 E7ENX8 843 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 TRIM38O00635 465 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 C8BP07358 591 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 GRIA3P42263 894 aa11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 YAP1P46937 504 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-209ENST00000429836 RAP1GAPP47736 663 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms