RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 Q6ZNX1 250 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 NET1Q7Z628 596 aaPredicted RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 SCN4BQ8IWT1 228 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SLC30A5Q8TAD4 765 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SLCO2A1Q92959 643 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 PRICKLE1Q96MT3 831 aaPredicted RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 KCNK16Q96T55 309 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 EMILIN2Q9BXX0 1053 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.72□□□□□ -0.53
CECR3-201ENST00000428828 INIPQ9NRY2 104 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 WHRNQ9P202 907 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 THEGQ9P2T0 379 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 R3HDM2Q9Y2K5 976 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 PCDHB5Q9Y5E4 795 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 FADS3Q9Y5Q0 445 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 MATN2O00339 956 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 FSCN2O14926 492 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 PER2O15055 1255 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 ADH1AP07327 375 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 GRIK1P39086 918 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 GPR15P49685 360 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 NEK3P51956 506 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 BCAT1P54687 386 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 BST2Q10589 180 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 SPARCL1Q14515 664 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 STILQ15468 1287 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 NFE2Q16621 373 aaPredicted RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 TRMT5Q32P41 509 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 C2CD6Q53TS8 623 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SYCP2LQ5T4T6 812 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 TMCO4Q5TGY1 634 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 ZNF449Q6P9G9 518 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 IZUMO2Q6UXV1 221 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 CLEC20AQ6ZU45 233 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 ADGRD2Q7Z7M1 963 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 RELL1Q8IUW5 271 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 MRPL43Q8N983 215 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 GDAP1Q8TB36 358 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 DENND1AQ8TEH3 1009 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SMARCD1Q96GM5 515 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 NSL1Q96IY1 281 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 VPS50Q96JG6 964 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 FAM161BQ96MY7 647 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 KLHL5Q96PQ7 755 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 DDX50Q9BQ39 737 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 SIKE1Q9BRV8 207 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 CRISPLD1Q9H336 500 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 NGRNQ9NPE2 291 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 TMEM30AQ9NV96 361 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SENP1Q9P0U3 644 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 FNIP2Q9P278 1114 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 SMG5Q9UPR3 1016 aaKnown RBP11.72□□□□□ -0.53
CECR3-201ENST00000428828 EFR3BQ9Y2G0 817 aa11.72□□□□□ -0.53
CECR3-201ENST00000428828 ARHGAP10A1A4S6 786 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 MIF4GDA9UHW6 222 aaKnown RBP11.71□□□□□ -0.53
CECR3-201ENST00000428828 VILLO15195 856 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 GYG2O15488 501 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 RNASEH1O60930 286 aaKnown RBP11.71□□□□□ -0.53
CECR3-201ENST00000428828 OBSL1O75147 1896 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 FKBP6O75344 327 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 VNN2O95498 520 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 ETS2P15036 469 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 ANPEPP15144 967 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 NPR3P17342 541 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 NSFP46459 744 aaKnown RBP11.71□□□□□ -0.53
CECR3-201ENST00000428828 HADHBP55084 474 aaKnown RBP11.71□□□□□ -0.53
CECR3-201ENST00000428828 AP2B1P63010 937 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 NOMO3P69849 1222 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 CAV1Q03135 178 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 IFRD2Q12894 506 aaPredicted RBP11.71□□□□□ -0.53
CECR3-201ENST00000428828 CDC16Q13042 620 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 DUSP4Q13115 394 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 MED21Q13503 144 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 KYNUQ16719 465 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 GRAMD4Q6IC98 578 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 C1orf228Q6PIY5 440 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.71□□□□□ -0.53
CECR3-201ENST00000428828 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 TMEM35BQ8NCS4 154 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 GPR152Q8TDT2 470 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 MCUR1Q96AQ8 359 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
CECR3-201ENST00000428828 TTC25Q96NG3 672 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 CGREF1Q99674 301 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 SMOQ99835 787 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 DUSP16Q9BY84 665 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 CDC42EP4Q9H3Q1 356 aaKnown RBP11.71□□□□□ -0.53
CECR3-201ENST00000428828 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 CYP4F11Q9HBI6 524 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 EURLQ9NYK6 297 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 CYTH4Q9UIA0 394 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 CROTQ9UKG9 612 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms