RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 UMODL1-AS1Q8N2C9 162 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 LZTR1Q8N653 840 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCNYQ8ND76 341 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 TTC8Q8TAM2 541 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 CSGALNACT1Q8TDX6 532 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 MAGOHBQ96A72 148 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCDC114Q96M63 670 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 QKIQ96PU8 341 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 FAM83CQ9BQN1 747 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 SPON2Q9BUD6 331 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 RPP25Q9BUL9 199 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 MUC3BQ9H195 1237 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 HPS4Q9NQG7 708 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 RBM12Q9NTZ6 932 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 NDFIP2Q9NV92 336 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 DNAJC17Q9NVM6 304 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 DTLQ9NZJ0 730 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 MARK1Q9P0L2 795 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 IGSF9Q9P2J2 1179 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 VPS28Q9UK41 221 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 NOTCH4Q99466 2003 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 DENND4AQ7Z401 1863 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 EYSQ5T1H1 3165 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CTAGE15A4D2H0 777 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ARHGAP42A6NI28 874 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 RASA4BC9J798 803 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 RASA4O43374 803 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 LIASO43766 372 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CACNG3O60359 315 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 PHF2O75151 1096 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CTAGE8P0CG41 777 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CSKP41240 450 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 NUMBP49757 651 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 PAPOLAP51003 745 aaKnown RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 NDST2P52849 883 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 OXCT1P55809 520 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 GNA12Q03113 381 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 KDSRQ06136 332 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 GALNT2Q10471 571 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 RUNX3Q13761 415 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 POLD3Q15054 466 aaPredicted RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 PDK1Q15118 436 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 NOMO1Q15155 1222 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 SIX1Q15475 284 aaPredicted RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ITPRIPL2Q3MIP1 535 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 RNF219Q5W0B1 726 aaPredicted RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 DARS2Q6PI48 645 aaKnown RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 RHBDF2Q6PJF5 856 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF783Q6ZMS7 281 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 SETD3Q86TU7 594 aaPredicted RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CTAGE6Q86UF2 777 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ADHFE1Q8IWW8 467 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CTAGE4Q8IX94 777 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 KLHL7Q8IXQ5 586 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ADGRG2Q8IZP9 1017 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CEP112Q8N8E3 955 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 NAT16Q8N8M0 369 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 PRELID2Q8N945 189 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF557Q8N988 423 aaPredicted RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 SPATA4Q8NEY3 305 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 WFDC5Q8TCV5 224 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 TFB1MQ8WVM0 346 aaKnown RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 NXPE3Q969Y0 559 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 HMCESQ96FZ2 354 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 P2RY11Q96G91 374 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 OLFM3Q96PB7 478 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 XPO6Q96QU8 1125 aaKnown RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 FERMT1Q9BQL6 677 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 CARD6Q9BX69 1037 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 FRMD8P1Q9BZ68 369 aaPredicted RBP8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 KLC2Q9H0B6 622 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 RETREG1Q9H6L5 497 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ECT2Q9H8V3 914 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 L2HGDHQ9H9P8 463 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 KCNK12Q9HB15 430 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 SP110Q9HB58 689 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ATP13A1Q9HD20 1204 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 HOMER3Q9NSC5 361 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ABCB8Q9NUT2 735 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 GTSE1Q9NYZ3 720 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 SEPT10Q9P0V9 454 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF212Q9UDV6 495 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF148Q9UQR1 794 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 TBC1D30Q9Y2I9 924 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 RAD54BQ9Y620 910 aa8.11□□□□□ -1.11
HMGA1P4-201ENST00000428643 PRUNE2Q8WUY3 3088 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 A0A0D9SEW6 157 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 ILVBLA1L0T0 632 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 OTOL1A6NHN0 477 aaPredicted RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 LOC730098B7Z3J9 87 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCDC188H7C350 402 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 SGK1O00141 431 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 CBX4O00257 560 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 ARNTLO00327 626 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 NCAM2O15394 837 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 TULP3O75386 442 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 STK10O94804 968 aaKnown RBP8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 GAS8O95995 478 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 RBP3P10745 1247 aa8.1□□□□□ -1.11
HMGA1P4-201ENST00000428643 PABPC1P11940 636 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms