RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SRPRAP08240 638 aaKnown RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3HP0C7X1 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 GOT1P17174 413 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 ABCB4P21439 1286 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 MAT2AP31153 395 aaKnown RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 DRD3P35462 400 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 PPP1R2P41236 205 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 RPL34P49207 117 aaKnown RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 STILQ15468 1287 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3GQ6DHY5 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3CQ6IPX1 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TTI2Q6NXR4 508 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 GJB7Q6PEY0 223 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 SND1Q7KZF4 910 aaKnown RBP eCLIP17.09■□□□□ 0.33
VARS-216ENST00000428445 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 CCDC117Q8IWD4 279 aaPredicted RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3Q8IZP1 549 aaPredicted RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 PDCD7Q8N8D1 485 aaKnown RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 CEP63Q96MT8 703 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 DKK4Q9UBT3 224 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 ADAMTS1Q9UHI8 967 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 SARDHQ9UL12 918 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 CA5BQ9Y2D0 317 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 ITIH6Q6UXX5 1313 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 GOLGA6L4A6NEF3 574 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 PSMA7O14818 248 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 RTN2O75298 545 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
VARS-216ENST00000428445 MOCS3O95396 460 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 TRUB2O95900 331 aaKnown RBP17.08■□□□□ 0.32
VARS-216ENST00000428445 JUPP14923 745 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 ITPKBP27987 946 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 IRAK1P51617 712 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 NUCB2P80303 420 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 APBA1Q02410 837 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 KCNH2Q12809 1159 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 ARID5BQ14865 1188 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 RNF219Q5W0B1 726 aaPredicted RBP17.08■□□□□ 0.32
VARS-216ENST00000428445 ZNF557Q8N988 423 aaPredicted RBP17.08■□□□□ 0.32
VARS-216ENST00000428445 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 NELFBQ8WX92 580 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 DHTKD1Q96HY7 919 aaPredicted RBP17.08■□□□□ 0.32
VARS-216ENST00000428445 TIGD1Q96MW7 591 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 SLC4A5Q9BY07 1137 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 UBE2TQ9NPD8 197 aaPredicted RBP17.08■□□□□ 0.32
VARS-216ENST00000428445 SCUBE2Q9NQ36 999 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 ARHGAP20Q9P2F6 1191 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 FZD4Q9ULV1 537 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 CTNND2Q9UQB3 1225 aa17.08■□□□□ 0.32
VARS-216ENST00000428445 TLR4O00206 839 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 BIN1O00499 593 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 DFNA5O60443 496 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 APOEP02649 317 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 C5AR1P21730 350 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 GGCXP38435 758 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 CCR5P51681 352 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 CENPCQ03188 943 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 TARDBPQ13148 414 aaKnown RBP eCLIP17.07■□□□□ 0.32
VARS-216ENST00000428445 STIM1Q13586 685 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
VARS-216ENST00000428445 KDM1BQ8NB78 822 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 FRS2Q8WU20 508 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 ZNF606Q8WXB4 792 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
VARS-216ENST00000428445 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
VARS-216ENST00000428445 GDF3Q9NR23 364 aa17.07■□□□□ 0.32
VARS-216ENST00000428445 TDRD6O60522 2096 aaKnown RBP17.07■□□□□ 0.32
VARS-216ENST00000428445 COL5A1P20908 1838 aaPredicted RBP17.07■□□□□ 0.32
VARS-216ENST00000428445 F5H5T6 163 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 THAP12O43422 761 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 TLX3O43711 291 aaPredicted RBP17.06■□□□□ 0.32
VARS-216ENST00000428445 SDC3O75056 442 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 GRAP2O75791 330 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 IGLV3-25P01717 112 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 PRB1P04280 392 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 ACADVLP49748 655 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 NXPH1P58417 271 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 YWHAZP63104 245 aaKnown RBP17.06■□□□□ 0.32
VARS-216ENST00000428445 SEMG2Q02383 582 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 GCNT1Q02742 428 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 CETN1Q12798 172 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 NNTQ13423 1086 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 EIF4EBP2Q13542 120 aaPredicted RBP17.06■□□□□ 0.32
VARS-216ENST00000428445 INAVAQ3KP66 663 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 ACCSLQ4AC99 568 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 TMPRSS12Q86WS5 348 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 DEFB106AQ8N104 65 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 WDTC1Q8N5D0 677 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 KLK6Q92876 244 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 BTN2A3PQ96KV6 586 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 CRACR2AQ9BSW2 395 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 POPDC2Q9HBU9 364 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 CNTN6Q9UQ52 1028 aa17.06■□□□□ 0.32
VARS-216ENST00000428445 A0A087WV48 116 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 FAM170AA1A519 330 aa17.05■□□□□ 0.32
VARS-216ENST00000428445 KCNU1A8MYU2 1149 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms