RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 PIK3CGP48736 1102 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 ZNF135P52742 658 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 MMRN1Q13201 1228 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 ATP13A4Q4VNC1 1196 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 PHYKPLQ8IUZ5 450 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 C3orf20Q8ND61 904 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 SYN2Q92777 582 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 NACC2Q96BF6 587 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 CNDP1Q96KN2 507 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 TBL1YQ9BQ87 522 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 MLPHQ9BV36 600 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 ALKBH4Q9NXW9 302 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 CFAP97Q9P2B7 532 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 PPLO60437 1756 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 H3BM21 787 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 RNASEH2AO75792 299 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 PAEPP09466 180 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 DGKAP23743 735 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 NFYCQ13952 458 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 SPRYD7Q5W111 196 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 RASAL3Q86YV0 1011 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 SHDQ96IW2 340 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 WDR24Q96S15 920 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 ZSWIM1Q9BR11 485 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 CEP41Q9BYV8 373 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 DPY30Q9C005 99 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 SOX13Q9UN79 622 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 QSOX1O00391 747 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 FDPSP14324 419 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 TPH1P17752 444 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 HPCAL1P37235 193 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 BNC1Q01954 994 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 SLC6A3Q01959 620 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 FMR1Q06787 632 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 TRIM71Q2Q1W2 868 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 SPOCD1Q6ZMY3 1216 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 SLC13A5Q86YT5 568 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 FAM20CQ8IXL6 584 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 RIBC1Q8N443 379 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 MYLPFQ96A32 169 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 FAM120BQ96EK7 910 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 CHP1Q99653 195 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 IL12RB2Q99665 862 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 FAIM2Q9BWQ8 316 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 INTS7Q9NVH2 962 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 MRPS33Q9Y291 106 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 HES2Q9Y543 173 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 VWDEQ8N2E2 1590 aa10.13□□□□□ -0.79
CLTCL1-202ENST00000427926 RHPN2P1A8MT19 583 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 TRDMT1O14717 391 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 KPNA5O15131 536 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SH3BGRLO75368 114 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 ZNF268Q14587 947 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 FBXO39Q8N4B4 442 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 FBXO36Q8NEA4 188 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 C18orf25Q96B23 403 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 ZNF536O15090 1300 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SEPT4O43236 478 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SLC25A12O75746 678 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 ELFN1P0C7U0 828 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SYN1P17600 705 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 CLK1P49759 484 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 ERFP50548 548 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 PMS1P54277 932 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SEC13P55735 322 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 USP4Q13107 963 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 CYLC2Q14093 348 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 RBM43Q6ZSC3 357 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 USP49Q70CQ1 688 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 RNF44Q7L0R7 432 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 KIF20BQ96Q89 1820 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 WDR18Q9BV38 432 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 CTDNEP1O95476 244 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 EPHX1P07099 455 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 PSMA4P25789 261 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 FMO4P31512 558 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 DHPSP49366 369 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 HSPA14Q0VDF9 509 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 TBC1D25Q3MII6 688 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 ABRAQ8N0Z2 381 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 HERVK_113Q902F9 699 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 MCRS1Q96EZ8 462 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 ASB8Q9H765 288 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 MANSC1Q9H8J5 431 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 PHPT1Q9NRX4 125 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SYNPO2Q9UMS6 1093 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 PSMD8P48556 350 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 MCL1Q07820 350 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 TMEM164Q5U3C3 297 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 MILR1Q7Z6M3 343 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SRLQ86TD4 932 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 UNC93AQ86WB7 457 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 ATL1Q8WXF7 558 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 BSNDQ8WZ55 320 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 SLC5A5Q92911 643 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 GFM2Q969S9 779 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 NCKIPSDQ9NZQ3 722 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 GMEB2Q9UKD1 530 aa10.12□□□□□ -0.79
CLTCL1-202ENST00000427926 LOC100653049A0A140TA62 436 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms