RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 VPS28Q9UK41 221 aa21.28■■□□□ 1
HSPG2-205ENST00000427897 DMXL1Q9Y485 3027 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 EDDM13A0A1B0GTR0 161 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 TARSL2A2RTX5 802 aaKnown RBP21.27■■□□□ 1
HSPG2-205ENST00000427897 TTC34A8MYJ7 566 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 SRGAP2O75044 1071 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 SIN3BO75182 1162 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 RHOCP08134 193 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 KRT3P12035 628 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 DESP17661 470 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 TNFAIP3P21580 790 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 MZF1P28698 734 aaPredicted RBP21.27■■□□□ 1
HSPG2-205ENST00000427897 MAPK8P45983 427 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 CLEC16AQ2KHT3 1053 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 HNRNPA1L2Q32P51 320 aaKnown RBP21.27■■□□□ 1
HSPG2-205ENST00000427897 PPM1JQ5JR12 505 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 SLC23A3Q6PIS1 610 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 APTXQ7Z2E3 356 aaKnown RBP21.27■■□□□ 1
HSPG2-205ENST00000427897 C14orf80Q86SX3 495 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 FAM131BQ86XD5 332 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 RXFP2Q8WXD0 754 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 SNX19Q92543 992 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 BTBD1Q9H0C5 482 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 SCML1Q9UN30 329 aa21.27■■□□□ 1
HSPG2-205ENST00000427897 CKAP5Q14008 2032 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 GOLGA6L19H0YKK7 550 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 SYPP08247 313 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 SERPINF2P08697 491 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 ENGP17813 658 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 MAOBP27338 520 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 KRT83P78385 493 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 DCAF12L1Q5VU92 463 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 MRGPRX3Q96LB0 322 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 C1orf74Q96LT6 269 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 HAPLN3Q96S86 360 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 PCDHB18PQ96TA0 734 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 OMDQ99983 421 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 SLCO3A1Q9UIG8 710 aa21.26■□□□□ 0.99
HSPG2-205ENST00000427897 TNRC6BQ9UPQ9 1833 aaKnown RBP21.25■□□□□ 0.99
HSPG2-205ENST00000427897 UNGP13051 313 aaPredicted RBP21.25■□□□□ 0.99
HSPG2-205ENST00000427897 STK19P49842 368 aaPredicted RBP21.25■□□□□ 0.99
HSPG2-205ENST00000427897 PLK1P53350 603 aa21.25■□□□□ 0.99
HSPG2-205ENST00000427897 ZSCAN23Q3MJ62 389 aa21.25■□□□□ 0.99
HSPG2-205ENST00000427897 OTUD1Q5VV17 481 aaPredicted RBP21.25■□□□□ 0.99
HSPG2-205ENST00000427897 CXorf57Q6NSI4 855 aaKnown RBP21.25■□□□□ 0.99
HSPG2-205ENST00000427897 MMAAQ8IVH4 418 aaKnown RBP21.25■□□□□ 0.99
HSPG2-205ENST00000427897 HDDC3Q8N4P3 179 aa21.25■□□□□ 0.99
HSPG2-205ENST00000427897 MYO19Q96H55 970 aa21.25■□□□□ 0.99
HSPG2-205ENST00000427897 FEM1AQ9BSK4 669 aa21.25■□□□□ 0.99
HSPG2-205ENST00000427897 RSPH9Q9H1X1 276 aaPredicted RBP21.25■□□□□ 0.99
HSPG2-205ENST00000427897 SNX10Q9Y5X0 201 aa21.25■□□□□ 0.99
HSPG2-205ENST00000427897 MED19A0JLT2 244 aaPredicted RBP21.24■□□□□ 0.99
HSPG2-205ENST00000427897 METTL12A8MUP2 240 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 E9PAM4 449 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 IGLV3-19P01714 112 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 OR1E1P30953 314 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 ASIC2Q16515 512 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 C15orf59Q2T9L4 293 aaPredicted RBP21.24■□□□□ 0.99
HSPG2-205ENST00000427897 PEAR1Q5VY43 1037 aaPredicted RBP21.24■□□□□ 0.99
HSPG2-205ENST00000427897 PHF13Q86YI8 300 aaPredicted RBP21.24■□□□□ 0.99
HSPG2-205ENST00000427897 ADAM33Q9BZ11 813 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 SGK2Q9HBY8 427 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 TMPRSS4Q9NRS4 437 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 FBXL12Q9NXK8 326 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 MYO6Q9UM54 1294 aa21.24■□□□□ 0.99
HSPG2-205ENST00000427897 FARP1Q9Y4F1 1045 aaPredicted RBP21.24■□□□□ 0.99
HSPG2-205ENST00000427897 MUC22E2RYF6 1773 aaPredicted RBP21.23■□□□□ 0.99
HSPG2-205ENST00000427897 FAM47DPA6NHR8 397 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 BNIP3LO60238 219 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 CNTN5O94779 1100 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 SEMA4FO95754 770 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 IL1BP01584 269 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 GPD1P21695 349 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 SLC8A1P32418 973 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 ACSL1P33121 698 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 IRAK1P51617 712 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 ARID5BQ14865 1188 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 CST6Q15828 149 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 CCDC14Q49A88 953 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 C6orf118Q5T5N4 469 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 C9orf64Q5T6V5 341 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 ACAD10Q6JQN1 1059 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 TRNP1Q6NT89 227 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 PPP1R2P3Q6NXS1 205 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 DNAJC24Q6P3W2 148 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 TFAP2DQ7Z6R9 452 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 DSG4Q86SJ6 1040 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 JOSD2Q8TAC2 188 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 C2orf49Q9BVC5 232 aaPredicted RBP21.23■□□□□ 0.99
HSPG2-205ENST00000427897 PCED1AQ9H1Q7 454 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 FSCN3Q9NQT6 498 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 ANLNQ9NQW6 1124 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 MPP6Q9NZW5 540 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 TBC1D30Q9Y2I9 924 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 ITIH6Q6UXX5 1313 aa21.23■□□□□ 0.99
HSPG2-205ENST00000427897 SPTBN4Q9H254 2564 aa21.22■□□□□ 0.99
HSPG2-205ENST00000427897 A0A1B0GTW7 788 aa21.22■□□□□ 0.99
HSPG2-205ENST00000427897 A0A1W2PQC6 194 aa21.22■□□□□ 0.99
HSPG2-205ENST00000427897 RNASEH2AO75792 299 aaKnown RBP21.22■□□□□ 0.99
HSPG2-205ENST00000427897 ENDOD1O94919 500 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms