RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 TAF11Q15544 211 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 CST9Q5W186 159 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 BZW1Q7L1Q6 419 aaKnown RBP11.9□□□□□ -0.51
FIRRE-201ENST00000427391 MAVSQ7Z434 540 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.51
FIRRE-201ENST00000427391 SPATA22Q8NHS9 363 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 CDKL2Q92772 493 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 MYLPFQ96A32 169 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 MKS1Q9NXB0 559 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 OR12D3Q9UGF7 316 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 VANGL2Q9ULK5 521 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 TSC2P49815 1807 aa11.9□□□□□ -0.51
FIRRE-201ENST00000427391 MGEA5O60502 916 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 ITGB1P05556 798 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 POLBP06746 335 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 CTGFP29279 349 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 HUNKP57058 714 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 MRPS6P82932 125 aaKnown RBP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 PEX6Q13608 980 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 ITGA9Q13797 1035 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 RCN1Q15293 331 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 TIFABQ6ZNK6 161 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 STRA8Q7Z7C7 330 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 TAC4Q86UU9 113 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 ATP2A3Q93084 1043 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 RNF34Q969K3 372 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 ZNF419Q96HQ0 510 aaPredicted RBP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 RSRC1Q96IZ7 334 aaKnown RBP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 UNKQ9C0B0 810 aaKnown RBP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 SNX15Q9NRS6 342 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 IGSF9Q9P2J2 1179 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 TXNDC16Q9P2K2 825 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 PGM1P36871 562 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 SLC1A6P48664 564 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 RWDD4Q6NW29 188 aaKnown RBP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 SLC25A41Q8N5S1 370 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 PNPLA1Q8N8W4 532 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 SMC1BQ8NDV3 1235 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 MYCBPQ99417 103 aaPredicted RBP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 WDCPQ9H6R7 721 aa11.89□□□□□ -0.51
FIRRE-201ENST00000427391 CPSF2Q9P2I0 782 aaKnown RBP11.89□□□□□ -0.51
FIRRE-201ENST00000427391 ZCWPW2A0A1B0GU75 182 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 MSI1O43347 362 aaKnown RBP11.88□□□□□ -0.51
FIRRE-201ENST00000427391 B3GAT3O94766 335 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 IL1BP01584 269 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 PROCP04070 461 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 CD1EP15812 388 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 CCR10P46092 362 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 SPDYAQ5MJ70 313 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 WASHC2DQ5SRD0 308 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 LRRTM3Q86VH5 581 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 PSTKQ8IV42 348 aaKnown RBP11.88□□□□□ -0.51
FIRRE-201ENST00000427391 WWP1Q9H0M0 922 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 EIF2B3Q9NR50 452 aaKnown RBP11.88□□□□□ -0.51
FIRRE-201ENST00000427391 THAP1Q9NVV9 213 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 WASF2Q9Y6W5 498 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 LAMA2P24043 3122 aaKnown RBP11.88□□□□□ -0.51
FIRRE-201ENST00000427391 SKAP2O75563 359 aaPredicted RBP11.88□□□□□ -0.51
FIRRE-201ENST00000427391 TOMM70O94826 608 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 AP2A1O95782 977 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 MT-CYBP00156 380 aaPredicted RBP11.88□□□□□ -0.51
FIRRE-201ENST00000427391 NMBRP28336 390 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 CD52P31358 61 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 ABL2P42684 1182 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 USP4Q13107 963 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
FIRRE-201ENST00000427391 KRT72Q14CN4 511 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 FSTL4Q6MZW2 842 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 CNTD1Q8N815 330 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 NRG4Q8WWG1 115 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 PPP1R36Q96LQ0 422 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 SORT1Q99523 831 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 MAN1C1Q9NR34 630 aa11.88□□□□□ -0.51
FIRRE-201ENST00000427391 DFFAO00273 331 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 BIRC5O15392 142 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 GLRA3O75311 464 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 SORBS2O94875 1100 aaKnown RBP11.87□□□□□ -0.51
FIRRE-201ENST00000427391 GP5P40197 560 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 PPIDQ08752 370 aaKnown RBP11.87□□□□□ -0.51
FIRRE-201ENST00000427391 TRIM32Q13049 653 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 ANKRD20A4Q4UJ75 823 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 RAB41Q5JT25 222 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 NAPRTQ6XQN6 538 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 KYAT3Q6YP21 454 aaKnown RBP11.87□□□□□ -0.51
FIRRE-201ENST00000427391 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 THTPAQ9BU02 230 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 CCDC106Q9BWC9 280 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 CNGB3Q9NQW8 809 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 IARS2Q9NSE4 1012 aaKnown RBP11.87□□□□□ -0.51
FIRRE-201ENST00000427391 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 ZMPSTE24O75844 475 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 OR4Q2P0C623 313 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 GARSP41250 739 aaKnown RBP11.87□□□□□ -0.51
FIRRE-201ENST00000427391 TUBB3Q13509 450 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 CYS1Q717R9 158 aa11.87□□□□□ -0.51
FIRRE-201ENST00000427391 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms