RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 RRM1P23921 792 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 SQLEQ14534 574 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 SPOCD1Q6ZMY3 1216 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CAMKK1Q8N5S9 505 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 NACC2Q96BF6 587 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 ACOX2Q99424 681 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 SEPHS2Q99611 448 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 KANSL3Q9P2N6 904 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 FSBPO95073 299 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 SLC45A4Q5BKX6 768 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 TNFAIP8L3Q5GJ75 292 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 MARC1Q5VT66 337 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 OSBPL11Q9BXB4 747 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 IRX2Q9BZI1 471 aaPredicted RBP14.69□□□□□ -0.06
PTPN13-203ENST00000427191 SHCBP1LQ9BZQ2 653 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 ADAM28Q9UKQ2 775 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 TUBA4AP68366 448 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 CSHL1Q14406 222 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 PTPAQ15257 358 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 SMAD5Q99717 465 aaKnown RBP14.69□□□□□ -0.06
PTPN13-203ENST00000427191 ADAM33Q9BZ11 813 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 SNX6Q9UNH7 406 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 MLYCDO95822 493 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 LYNP07948 512 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 BGNP21810 368 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 S100A3P33764 101 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 GLRBP48167 497 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 ACTR3P61158 418 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 OTUD3Q5T2D3 398 aaPredicted RBP14.69□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF549Q6P9A3 640 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 SCAIQ8N9R8 606 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 UBA3Q8TBC4 463 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 TMEM138Q9NPI0 162 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 PNPLA3Q9NST1 481 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 MAP2P11137 1827 aaKnown RBP14.69□□□□□ -0.06
PTPN13-203ENST00000427191 ASTN2O75129 1339 aaPredicted RBP14.69□□□□□ -0.06
PTPN13-203ENST00000427191 RPS12P25398 132 aaKnown RBP14.69□□□□□ -0.06
PTPN13-203ENST00000427191 N4BP2L1Q5TBK1 243 aaPredicted RBP14.69□□□□□ -0.06
PTPN13-203ENST00000427191 STOX1Q6ZVD7 989 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 HDAC7Q8WUI4 952 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 TRIM10Q9UDY6 481 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 MRASO14807 208 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 TSHRP16473 764 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 PPP1R3GB7ZBB8 358 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 RBAK-RBAKDNI3L0D1 243 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 SEC22BO75396 215 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 GNRH1P01148 92 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 BRINP3Q76B58 766 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 FAM20CQ8IXL6 584 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 FICDQ9BVA6 458 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 SPAG4Q9NPE6 437 aa14.69□□□□□ -0.06
PTPN13-203ENST00000427191 GOLGA4Q13439 2230 aaKnown RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 FOXN1O15353 648 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 FARP2O94887 1054 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 SEC24AO95486 1093 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 LRPAP1P30533 357 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 MAPK8P45983 427 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 GATAD2AQ86YP4 633 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 GJD3Q8N144 294 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 ENTPD7Q9NQZ7 604 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 PFDN2Q9UHV9 154 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 SMNDC1O75940 238 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 CBX5P45973 191 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 MFSD7Q6UXD7 560 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 FAIM2Q9BWQ8 316 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 IL22Q9GZX6 179 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 SMURF2Q9HAU4 748 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 MID1IP1Q9NPA3 183 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 ZNRF3Q9ULT6 936 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 MDM4O15151 490 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 NDUFB10O96000 172 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 MBL2P11226 248 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 DLG4P78352 724 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 C5orf22Q49AR2 442 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 TSPAN14Q8NG11 270 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 MUC13Q9H3R2 512 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 KCNH7Q9NS40 1196 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 FRMPD1Q5SYB0 1578 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 RIPK2O43353 540 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 PPIBP23284 216 aaKnown RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 CYP2F1P24903 491 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 BAATQ14032 418 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 MILR1Q7Z6M3 343 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 PRR12Q9ULL5 1215 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 ABCA9Q8IUA7 1624 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 NKRFO15226 690 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 TNFRSF8P28908 595 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 UGT1A5P35504 534 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 AP3S2P59780 193 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 HSF2Q03933 536 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 NAA30Q147X3 362 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 STARD3Q14849 445 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF280DQ6N043 979 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 DPF2Q92785 391 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 CYP4F12Q9HCS2 524 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 OPTCQ9UBM4 332 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 NEXMIFQ5QGS0 1516 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 SEMA3DO95025 777 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 ALDH9A1P49189 494 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms