RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 GNAZP19086 355 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 FDFT1P37268 417 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 PTDSS1P48651 473 aaKnown RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 OCRLQ01968 901 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 IFRD2Q12894 506 aaPredicted RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 GPNMBQ14956 572 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 RALGAPA2Q2PPJ7 1873 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TEX44Q53QW1 395 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 FASTKD1Q53R41 847 aaKnown RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 XKR4Q5GH76 650 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 HFE2Q6ZVN8 426 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 SLC24A5Q71RS6 500 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 BZW1Q7L1Q6 419 aaKnown RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 STRADAQ7RTN6 431 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 RASSF3Q86WH2 238 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TEX9Q8N6V9 391 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 PRDM12Q9H4Q4 367 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 SYBUQ9NX95 663 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 MOCS1Q9NZB8 636 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 TXNDC16Q9P2K2 825 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 GIT1Q9Y2X7 761 aa10.94□□□□□ -0.66
CUX1-205ENST00000425244 HBS1LQ9Y450 684 aaKnown RBP10.94□□□□□ -0.66
CUX1-205ENST00000425244 EEF2KO00418 725 aaKnown RBP10.93□□□□□ -0.66
CUX1-205ENST00000425244 CAPN9O14815 690 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 XPO1O14980 1071 aaKnown RBP10.93□□□□□ -0.66
CUX1-205ENST00000425244 KRT36O76013 467 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 ERVK-10P10266 1014 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 GATMP50440 423 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 RAB27AP51159 221 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 MAP3K7CLP57077 242 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 DEUP1Q05D60 604 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 CRYMQ14894 314 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 KRT72Q14CN4 511 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 RCN1Q15293 331 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 SV2CQ496J9 727 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 HSF5Q4G112 596 aaPredicted RBP10.93□□□□□ -0.66
CUX1-205ENST00000425244 WSCD1Q658N2 575 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 TREML1Q86YW5 311 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.93□□□□□ -0.66
CUX1-205ENST00000425244 FBXO27Q8NI29 283 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 SLC7A14Q8TBB6 771 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 DTX3LQ8TDB6 740 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 FERMT1Q9BQL6 677 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 WWP1Q9H0M0 922 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 SLC38A7Q9NVC3 462 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 KLHL8Q9P2G9 620 aaPredicted RBP10.93□□□□□ -0.66
CUX1-205ENST00000425244 HACD1B0YJ81 288 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 ALDOAP04075 364 aaKnown RBP10.93□□□□□ -0.66
CUX1-205ENST00000425244 NPR3P17342 541 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 PGM1P36871 562 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 PNPLA4P41247 253 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 MXRA7P84157 204 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 TCTN1Q2MV58 587 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 PPM1JQ5JR12 505 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 GLB1LQ6UWU2 654 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 PACS1Q6VY07 963 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 PID1Q7Z2X4 250 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 ZNF280BQ86YH2 543 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 ZNF483Q8TF39 744 aaPredicted RBP10.93□□□□□ -0.66
CUX1-205ENST00000425244 APBB2Q92870 758 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 NAF1Q96HR8 494 aaKnown RBP10.93□□□□□ -0.66
CUX1-205ENST00000425244 EBF4Q9BQW3 602 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 DUSP16Q9BY84 665 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 DNAI2Q9GZS0 605 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 RGS18Q9NS28 235 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 PIGVQ9NUD9 493 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 TMEM39AQ9NV64 488 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 ZFATQ9P243 1243 aa10.93□□□□□ -0.66
CUX1-205ENST00000425244 C9IYK1 514 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 OPHN1O60890 802 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ZNF623O75123 536 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 DAB1O75553 588 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ITGB1P05556 798 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 PGAM1P18669 254 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 BRCC3P46736 316 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 PDE1CQ14123 709 aaPredicted RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 UBAP2LQ14157 1087 aaKnown RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 PDK1Q15118 436 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ACSBG2Q5FVE4 666 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 OTUD1Q5VV17 481 aaPredicted RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 LRRC8BQ6P9F7 803 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ABI1Q8IZP0 508 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ZNF567Q8N184 647 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 WDR60Q8WVS4 1066 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 STMN2Q93045 179 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 FAM161BQ96MY7 647 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 DCLRE1BQ9H816 532 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 KRT82Q9NSB4 513 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 GDAP2Q9NXN4 497 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 STAP1Q9ULZ2 295 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 PRG3Q9Y2Y8 225 aaPredicted RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 PDCD11Q14690 1871 aaKnown RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 FAM72CH0Y354 149 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 IL1BP01584 269 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 PTPN1P18031 435 aaKnown RBP10.92□□□□□ -0.66
CUX1-205ENST00000425244 SCNN1AP37088 669 aa10.92□□□□□ -0.66
CUX1-205ENST00000425244 ABCG1P45844 678 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms