RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 STARD8Q92502 1023 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 OSBPL11Q9BXB4 747 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 TEKT3Q9BXF9 490 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 GBA3Q9H227 469 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 TCF7L2Q9NQB0 619 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 NCKIPSDQ9NZQ3 722 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 DAPK2Q9UIK4 370 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 WDR27A2RRH5 827 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 TMEM233B4DJY2 109 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 CST3P01034 146 aaPredicted RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 LTFP02788 710 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 PABPC1P11940 636 aaKnown RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 SESN2P58004 480 aaPredicted RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ABCE1P61221 599 aaKnown RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ROR1Q01973 937 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 CUL2Q13617 745 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 MAPK11Q15759 364 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 SCYL2Q6P3W7 929 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ZBTB49Q6ZSB9 765 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 PIWIL3Q7Z3Z3 882 aaKnown RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 PSD4Q8NDX1 1056 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 TMEM161BQ8NDZ6 487 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 BPIFB6Q8NFQ5 453 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 CYGBQ8WWM9 190 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 BORCS5Q969J3 196 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 MUC3BQ9H195 1237 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 EHD1Q9H4M9 534 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 RBAKQ9NYW8 714 aaPredicted RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 PRR12Q9ULL5 1215 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 UBE4BO95155 1302 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 AKAP10O43572 662 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 PLIN3O60664 434 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 FOSP01100 380 aaPredicted RBP11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 MT-ND1P03886 318 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 ERBB2P04626 1255 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 CD19P15391 556 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 CDH6P55285 790 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 MYBPC2Q14324 1141 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 KCNJ11Q14654 390 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 LSM12Q3MHD2 195 aaKnown RBP11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 IQCF2Q8IXL9 164 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 TFAP2BQ92481 460 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 FERMT1Q9BQL6 677 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 MARCH7Q9H992 704 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 CLK4Q9HAZ1 481 aaKnown RBP11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.53□□□□□ -0.561e-8■■■■□ 20.6
SEC61A1-202ENST00000424880 AURKCQ9UQB9 309 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 AP4S1Q9Y587 144 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 SPO11Q9Y5K1 396 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 EIF3FO00303 357 aaPredicted RBP11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 STAM2O75886 525 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 BAIAP3O94812 1187 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 CYP2C9P11712 490 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 ME2P23368 584 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 TYK2P29597 1187 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 PRDX6P30041 224 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 GLRBP48167 497 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 IREB2P48200 963 aaKnown RBP11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 RPS3AP61247 264 aaKnown RBP11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 IRF9Q00978 393 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 RAB39AQ14964 217 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 RGS21Q2M5E4 152 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 DSG4Q86SJ6 1040 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 ATP6V0A1Q93050 837 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 RTKNQ9BST9 563 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 SORCS3Q9UPU3 1222 aa11.53□□□□□ -0.56
SEC61A1-202ENST00000424880 PRSS51A0A1B0GVH4 220 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 CFAP99D6REC4 459 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 METTL18O95568 372 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 SERPINE1P05121 402 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 PRKCGP05129 697 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 ERVK-10P10266 1014 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 KRT3P12035 628 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 CCT8P50990 548 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 ANKRD26P1Q6NSI1 321 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 APOBEC3HQ6NTF7 200 aaKnown RBP11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 NIPAL1Q6NVV3 410 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 VASH1Q7L8A9 365 aaPredicted RBP11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 TMEM126BQ8IUX1 230 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 HERC6Q8IVU3 1022 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 CADM3Q8N126 398 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 SPATA6LQ8N4H0 392 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 PQLC3Q8N755 202 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 TDRD5Q8NAT2 981 aaKnown RBP11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 VCPIP1Q96JH7 1222 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 SERPINI1Q99574 410 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 GLT8D2Q9H1C3 349 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 IL1RL2Q9HB29 575 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 ATAD3AQ9NVI7 634 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 SLX4Q8IY92 1834 aa11.52□□□□□ -0.56
SEC61A1-202ENST00000424880 ADAMTSL1Q8N6G6 1762 aa11.52□□□□□ -0.57
SEC61A1-202ENST00000424880 ZNF839A8K0R7 811 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms