RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MLPHQ9BV36 600 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-204ENST00000423636 SENP6Q9GZR1 1112 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-204ENST00000423636 MYO9BQ13459 2157 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 SKAP2O75563 359 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-204ENST00000423636 ANP32DO95626 131 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 SLC5A3P53794 718 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 EFEMP1Q12805 493 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 SH2D5Q6ZV89 423 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 RTN4RL1Q86UN2 441 aaPredicted RBP12.21□□□□□ -0.45
PTPRN-204ENST00000423636 CNTD1Q8N815 330 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 MAF1Q9H063 256 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 DNAJC16Q9Y2G8 782 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 DERAQ9Y315 318 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 PCDHA11Q9Y5I1 949 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 ACTL7BQ9Y614 415 aa12.21□□□□□ -0.45
PTPRN-204ENST00000423636 FCHO1O14526 889 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 GABRDO14764 452 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 DUSP11O75319 330 aaKnown RBP12.21□□□□□ -0.46
PTPRN-204ENST00000423636 DAB1O75553 588 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 KRT38O76015 456 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 STAU1O95793 577 aaKnown RBP12.21□□□□□ -0.46
PTPRN-204ENST00000423636 MPP1Q00013 466 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 PTPRRQ15256 657 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 STRADAQ7RTN6 431 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 DCLK2Q8N568 766 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 TOP6BLQ8N6T0 577 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 CCDC124Q96CT7 223 aaKnown RBP12.21□□□□□ -0.46
PTPRN-204ENST00000423636 NDNQ99608 321 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 SPC25Q9HBM1 224 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 GGA2Q9UJY4 613 aa12.21□□□□□ -0.46
PTPRN-204ENST00000423636 MGRN1O60291 552 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 CNTN5O94779 1100 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 VAPBO95292 243 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 HDCP19113 662 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-204ENST00000423636 PLK1P53350 603 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 SNX16P57768 344 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 BTBD8Q5XKL5 378 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 FAM13CQ8NE31 585 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 FCRL2Q96LA5 508 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-204ENST00000423636 OLFM3Q96PB7 478 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 SEPT5Q99719 369 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-204ENST00000423636 KATNAL1Q9BW62 490 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 DCLK1O15075 740 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 PAGE1O75459 146 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 HAUS5O94927 633 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 PDK1Q15118 436 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 CEP128Q6ZU80 1094 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-204ENST00000423636 KLHDC9Q8NEP7 349 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 STK32AQ8WU08 396 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 NSMCE1Q8WV22 266 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 EXOC2Q96KP1 924 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 OSBPL1AQ9BXW6 950 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 FBXW11Q9UKB1 542 aa12.2□□□□□ -0.46
PTPRN-204ENST00000423636 OR51F1A6NGY5 319 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 HHLA1C9JL84 531 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 TK2O00142 265 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 STK10O94804 968 aaKnown RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 DLDP09622 509 aaKnown RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 DPYSQ14117 519 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 PRKD1Q15139 912 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 RASA2Q15283 850 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 PSMD5Q16401 504 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 LRRC36Q1X8D7 754 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 RNF43Q68DV7 783 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 TAF2Q6P1X5 1199 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 BHLHA9Q7RTU4 235 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ZSCAN18Q8TBC5 510 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 SMARCD1Q96GM5 515 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 DENND2DQ9H6A0 471 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 SENP1Q9P0U3 644 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 EMCNQ9ULC0 261 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 NEMP2A6NFY4 417 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 PRR5-ARHGAP8B1AHC4 643 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 CHUKO15111 745 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 TSPAN3O60637 253 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 AXLP30530 894 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 TUBP50607 506 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 SEMA5AQ13591 1074 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 MFSD14CQ5VZR4 134 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 FSTL4Q6MZW2 842 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ESRP1Q6NXG1 681 aaKnown RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 TMEM173Q86WV6 379 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ZDHHC17Q8IUH5 632 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 WDR60Q8WVS4 1066 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 EXT2Q93063 718 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 MYEOVQ96EZ4 313 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 SCYL1Q96KG9 808 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 FICDQ9BVA6 458 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 TMEM88BA6NKF7 163 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 E9PBE3 544 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 J3KR12 359 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 PPP1R12AO14974 1030 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-204ENST00000423636 GYG2O15488 501 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 KLHL41O60662 606 aa12.19□□□□□ -0.46
PTPRN-204ENST00000423636 ESRRAP11474 423 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms