RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MPOP05164 745 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 MYL1P05976 194 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 RPL13P26373 211 aaKnown RBP17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 LSSP48449 732 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 KCNC4Q03721 635 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 STAT4Q14765 748 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 MMS22LQ6ZRQ5 1243 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 TRIM69Q86WT6 500 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 CCDC117Q8IWD4 279 aaPredicted RBP17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 OR4C6Q8NH72 309 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 UBA3Q8TBC4 463 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 PLRG1O43660 514 aaKnown RBP17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 OPA1O60313 960 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 GABBR2O75899 941 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 SETSIPP0DME0 302 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 VDRP11473 427 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 CKMT1AP12532 417 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 DGKAP23743 735 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 DAB2P98082 770 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 VAC14Q08AM6 782 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 ADAM9Q13443 819 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 CDH18Q13634 790 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 LY6DQ14210 128 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 SLC35F5Q8WV83 523 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 FCRL2Q96LA5 508 aaPredicted RBP17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 POLR1BQ9H9Y6 1135 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 KIAA1257Q9ULG3 409 aa17.3■□□□□ 0.36
CHCHD3-202ENST00000423635 PRAMEF26H0Y7S4 382 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 O00370 1275 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 ARHGAP6O43182 974 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 RNGTTO60942 597 aaKnown RBP17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 GP1BAP07359 652 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 GIMD1P0DJR0 217 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 LCP1P13796 627 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 ME1P48163 572 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 MXI1P50539 228 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 GABREP78334 506 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 DCAF6Q58WW2 860 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 IGF2-ASQ6U949 168 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 APCDD1Q8J025 514 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 KCNE4Q8WWG9 221 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 MED8Q96G25 268 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 KLHDC7BQ96G42 594 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 SLC39A13Q96H72 371 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 DEPDC7Q96QD5 511 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 SPAG5Q96R06 1193 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 NUCKS1Q9H1E3 243 aaKnown RBP17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 ASCL3Q9NQ33 180 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 KLHL11Q9NVR0 708 aa17.29■□□□□ 0.36
CHCHD3-202ENST00000423635 KLK10O43240 276 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 LZTS3O60299 673 aaPredicted RBP17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 RTN2O75298 545 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 USP12O75317 370 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 WISP1O95388 367 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 MAT2AP31153 395 aaKnown RBP17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 NNMTP40261 264 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 VASPP50552 380 aaPredicted RBP17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 METAP1P53582 386 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 NNTQ13423 1086 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 HS1BP3Q53T59 392 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 RNF219Q5W0B1 726 aaPredicted RBP17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 PMF1Q6P1K2 205 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 LCLAT1Q6UWP7 414 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 CFAP52Q8N1V2 620 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 FRS2Q8WU20 508 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 EEF2KMTQ96G04 330 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 UCKL1Q9NWZ5 548 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 TLR6Q9Y2C9 796 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 SPTA1P02549 2419 aa17.28■□□□□ 0.36
CHCHD3-202ENST00000423635 HECTD1Q9ULT8 2610 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 A0A1B0GVM2 712 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 STX10O60499 249 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 RHOBTB3O94955 611 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 LTFP02788 710 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 FYNP06241 537 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 CD19P15391 556 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 SKOR1P84550 965 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 CUL2Q13617 745 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 SLC12A1Q13621 1099 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 SETMARQ53H47 684 aaPredicted RBP17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 FAM46CQ5VWP2 391 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 TMEM145Q8NBT3 493 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 THSD1Q9NS62 852 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 USP25Q9UHP3 1055 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 SARDHQ9UL12 918 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 COQ4Q9Y3A0 265 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 CEP83Q9Y592 693 aa17.27■□□□□ 0.36
CHCHD3-202ENST00000423635 DOCK9Q9BZ29 2069 aa17.27■□□□□ 0.35
CHCHD3-202ENST00000423635 CSO75390 466 aaKnown RBP17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 VAV1P15498 845 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 STK19P49842 368 aaPredicted RBP17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 PLK1P53350 603 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 SULT2A1Q06520 285 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 KCNMA1Q12791 1236 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 ZCWPW2Q504Y3 356 aa17.26■□□□□ 0.35
CHCHD3-202ENST00000423635 AGBL4Q5VU57 503 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms