RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 MTHFRP42898 656 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 GLUD2P49448 558 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 MAN2A2P49641 1150 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 LIG4P49917 911 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 ATXN1P54253 815 aaKnown RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 OSTNP61366 133 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 BECN1Q14457 450 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 KARSQ15046 597 aaKnown RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 ATL3Q6DD88 541 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 SLFN12LQ6IEE8 588 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 DCLRE1AQ6PJP8 1040 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 STXBP4Q6ZWJ1 553 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 GSPT2Q8IYD1 628 aaKnown RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 COLGALT2Q8IYK4 626 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 C12orf76Q8N812 135 aaPredicted RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 ANKRD53Q8N9V6 530 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 TDRD5Q8NAT2 981 aaKnown RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 GPR150Q8NGU9 434 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 RUBCNQ92622 972 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 UROC1Q96N76 676 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 ACO2Q99798 780 aaKnown RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 PDZD7Q9H5P4 517 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 PARVGQ9HBI0 331 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 MIOSQ9NXC5 875 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 NDOR1Q9UHB4 597 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 ADAM28Q9UKQ2 775 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 EXOC7Q9UPT5 735 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 MRPS23Q9Y3D9 190 aaKnown RBP6.09□□□□□ -1.43
LINC00458-201ENST00000423442 ACACBO00763 2458 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 CEP250Q9BV73 2442 aa6.09□□□□□ -1.43
LINC00458-201ENST00000423442 ZMYM2Q9UBW7 1377 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 SF3B1O75533 1304 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 SMIM28A0A1B0GU29 152 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 K7ENM7 598 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 HNRNPDLO14979 420 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 INPPL1O15357 1258 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 XPOTO43592 962 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 B3GAT3O94766 335 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 CLTAP09496 248 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 HARSP12081 509 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 IDEP14735 1019 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 GAP43P17677 238 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 RPL9P32969 192 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 ME1P48163 572 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 SLC12A3P55017 1021 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 BPIFB4P59827 614 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 ADAM8P78325 824 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 TDGQ13569 410 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 POSTNQ15063 836 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 SPECC1Q5M775 1068 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 RARS2Q5T160 578 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 FAM171A1Q5VUB5 890 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 FAM111BQ6SJ93 734 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 OVCH1Q7RTY7 1134 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 MRGPREQ86SM8 312 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 PALB2Q86YC2 1186 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 SYCP3Q8IZU3 236 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 IQUBQ8NA54 791 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 AUTS2Q8WXX7 1259 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 RAD54LQ92698 747 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 GCDHQ92947 438 aaPredicted RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 FOXRED1Q96CU9 486 aaPredicted RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 EPSTI1Q96J88 318 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 TSPAN18Q96SJ8 248 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 REEP2Q9BRK0 252 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 PYM1Q9BRP8 204 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 KIFC3Q9BVG8 833 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 TARS2Q9BW92 718 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 GPR87Q9BY21 358 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 CCDC113Q9H0I3 377 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 ZBP1Q9H171 429 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 PIF1Q9H611 641 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 MRPL44Q9H9J2 332 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 PLEKHA5Q9HAU0 1116 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 ANKFY1Q9P2R3 1169 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 TBX20Q9UMR3 447 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 MAP1BP46821 2468 aaKnown RBP6.08□□□□□ -1.44
LINC00458-201ENST00000423442 FANCMQ8IYD8 2048 aa6.08□□□□□ -1.44
LINC00458-201ENST00000423442 OTOGLQ3ZCN5 2332 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 CCDC195A0A1B0GUA6 201 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 UBE2QL1A1L167 161 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 CASTOR2A6NHX0 329 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 H7C4K7 107 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 H2AFYO75367 372 aaKnown RBP6.07□□□□□ -1.44
LINC00458-201ENST00000423442 RECQL4O94761 1208 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 GLUD1P00367 558 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 C1RP00736 705 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 CNPP09543 421 aaKnown RBP6.07□□□□□ -1.44
LINC00458-201ENST00000423442 SP9P0CG40 484 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 ELF1P32519 619 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 ALDH6A1Q02252 535 aaKnown RBP6.07□□□□□ -1.44
LINC00458-201ENST00000423442 DSC1Q08554 894 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 RESTQ13127 1097 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 PTPAQ15257 358 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 TMEM119Q4V9L6 283 aa6.07□□□□□ -1.44
LINC00458-201ENST00000423442 MBNL2Q5VZF2 373 aaKnown RBP6.07□□□□□ -1.44
LINC00458-201ENST00000423442 FAM173BQ6P4H8 233 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms