RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 GDF6Q6KF10 455 aaPredicted RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 TRIB2Q92519 343 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 LRRC40Q9H9A6 602 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 TRPM5Q9NZQ8 1165 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 KANSL3Q9P2N6 904 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 AFF4Q9UHB7 1163 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 EP400Q96L91 3159 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 H0Y626 953 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 HCRTO43612 131 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 SMNDC1O75940 238 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 SERPINE1P05121 402 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 TLE2Q04725 743 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 USP4Q13107 963 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 CST9Q5W186 159 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 TSHZ1Q6ZSZ6 1077 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 FAM183BPQ6ZVS7 135 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 ZNF786Q8N393 782 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PPHLN1Q8NEY8 458 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 DDI1Q8WTU0 396 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PPP2R3CQ969Q6 453 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 LGMNQ99538 433 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PRPF18Q99633 342 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 SNRNP25Q9BV90 132 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 EFCAB1Q9HAE3 211 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 VANGL2Q9ULK5 521 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PCDHB12Q9Y5F1 795 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 CITO14578 2027 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 ASMTLO95671 621 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 S100BP04271 92 aaPredicted RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 GRK2P25098 689 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 LMO2P25791 158 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 NOVP48745 357 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 NAGLUP54802 743 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 CYLC2Q14093 348 aaPredicted RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 GRB14Q14449 540 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 UGP2Q16851 508 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 CNDP1Q96KN2 507 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PIF1Q9H611 641 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 COPS7BQ9H9Q2 264 aaPredicted RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 DMAP1Q9NPF5 467 aaPredicted RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 KCNK4Q9NYG8 393 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 ZMYND8Q9ULU4 1186 aaPredicted RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 AKAP11Q9UKA4 1901 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 CCDC85CA6NKD9 419 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 SNX2O60749 519 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 OR1D2P34982 312 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 FDFT1P37268 417 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 SKIV2L2P42285 1042 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PTK2BQ14289 1009 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PARP6Q2NL67 630 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 LRRC38Q5VT99 294 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 C9orf57Q5W0N0 161 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 SLC39A4Q6P5W5 647 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PTAR1Q7Z6K3 402 aaPredicted RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 CMC1Q7Z7K0 106 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 RBM15BQ8NDT2 890 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 TFAP2BQ92481 460 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 MRPS31Q92665 395 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PBXIP1Q96AQ6 731 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 RNF157Q96PX1 679 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 NTPCRQ9BSD7 190 aaKnown RBP15.4■□□□□ 0.06
SHISA9-201ENST00000423335 DPEP3Q9H4B8 488 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 AAASQ9NRG9 546 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 PTCH2Q9Y6C5 1203 aa15.4■□□□□ 0.06
SHISA9-201ENST00000423335 CCDC88AQ3V6T2 1871 aa15.39■□□□□ 0.06
SHISA9-201ENST00000423335 MYO5AQ9Y4I1 1855 aaKnown RBP15.39■□□□□ 0.06
SHISA9-201ENST00000423335 HOXA2O43364 376 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 PLD1Q13393 1074 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CDH18Q13634 790 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CSHL1Q14406 222 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 TBCCQ15814 346 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 ZNF618Q5T7W0 954 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CATSPER1Q8NEC5 780 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 SEMA6AQ9H2E6 1030 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 NKX1-2Q9UD57 310 aaPredicted RBP15.39■□□□□ 0.05
SHISA9-201ENST00000423335 ZNF212Q9UDV6 495 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 NR2E3Q9Y5X4 410 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 SYN1P17600 705 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CDKN2BP42772 138 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CSE1LP55060 971 aaKnown RBP15.39■□□□□ 0.05
SHISA9-201ENST00000423335 NRF1Q16656 503 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 FAM83EQ2M2I3 478 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
SHISA9-201ENST00000423335 NRBF2Q96F24 287 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 ARHGEF3Q9NR81 526 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 WASF2Q9Y6W5 498 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 ADGRA2Q96PE1 1338 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 LTFP02788 710 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CYBBP04839 570 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 GP5P40197 560 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 DUSP4Q13115 394 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 FUT11Q495W5 492 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 AGKQ53H12 422 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 ULK2Q8IYT8 1036 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 SMARCD1Q96GM5 515 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 ELOVL4Q9GZR5 314 aa15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CORO1CQ9ULV4 474 aaPredicted RBP15.39■□□□□ 0.05
SHISA9-201ENST00000423335 CBX4O00257 560 aa15.38■□□□□ 0.05
SHISA9-201ENST00000423335 ANPEPP15144 967 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms