RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 TAC4Q86UU9 113 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 OXR1Q8N573 874 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 SPATA20Q8TB22 786 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 TSC1Q92574 1164 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 BTN2A3PQ96KV6 586 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 RPL10LQ96L21 214 aaKnown RBP17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 CEP63Q96MT8 703 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 ST7Q9NRC1 585 aa17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 XPO7Q9UIA9 1087 aaKnown RBP17.42■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3DA0A087WVF3 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3IA0A087WXS9 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3EA0A087X179 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3KA0A087X1G2 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3FA6NER0 549 aaPredicted RBP17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3LB9A6J9 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 CAPN9O14815 690 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 P4HA2O15460 535 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 IL1BP01584 269 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3HP0C7X1 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TACR2P21452 398 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 MZF1P28698 734 aaPredicted RBP17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 NUCB2P80303 420 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 GCNT1Q02742 428 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 ZC3H12AQ5D1E8 599 aaKnown RBP17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 RAP1GAP2Q684P5 730 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3GQ6DHY5 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3CQ6IPX1 549 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 RRAGAQ7L523 313 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 PRPF39Q86UA1 669 aaKnown RBP17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 CHSY1Q86X52 802 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TBC1D3Q8IZP1 549 aaPredicted RBP17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 MFSD2AQ8NA29 543 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 NRSN2Q9GZP1 204 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 KDM4CQ9H3R0 1056 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 TJP2Q9UDY2 1190 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 ASXL3Q9C0F0 2248 aa17.41■□□□□ 0.38
UPF3AP3-201ENST00000420996 PSMA7O14818 248 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 IGLV3-25P01717 112 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 DRD3P35462 400 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 NUDT1P36639 197 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 EIF2S3P41091 472 aaKnown RBP17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 STK19P49842 368 aaPredicted RBP17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 CLDN6P56747 220 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 PPP2CBP62714 309 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 PPP2CAP67775 309 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 SULT2A1Q06520 285 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 BNIP3Q12983 259 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 TARDBPQ13148 414 aaKnown RBP eCLIP17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 ILKQ13418 452 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 STIM1Q13586 685 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 RTP5Q14D33 572 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 CCDC40Q4G0X9 1142 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 SFMBT2Q5VUG0 894 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 NAPEPLDQ6IQ20 393 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 FBXL19Q6PCT2 694 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 ARHGEF19Q8IW93 802 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 PIP4K2CQ8TBX8 421 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 STK32AQ8WU08 396 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 FAM131CQ96AQ9 280 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 DHTKD1Q96HY7 919 aaPredicted RBP17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 UBL7Q96S82 380 aaPredicted RBP17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 CNTN6Q9UQ52 1028 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 AK5Q9Y6K8 562 aa17.4■□□□□ 0.38
UPF3AP3-201ENST00000420996 ARID1BQ8NFD5 2236 aaPredicted RBP17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 TRUB2O95900 331 aaKnown RBP17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 VAV1P15498 845 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 ITPKBP27987 946 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 PLK1P53350 603 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 SEMG2Q02383 582 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 HES3Q5TGS1 186 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 KANSL1Q7Z3B3 1105 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 IQCHQ86VS3 1027 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 ATP6V0D2Q8N8Y2 350 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 EHBP1Q8NDI1 1231 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 FRS2Q8WU20 508 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 ERCC4Q92889 916 aaPredicted RBP17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 SLC4A5Q9BY07 1137 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 POPDC2Q9HBU9 364 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 ARHGAP20Q9P2F6 1191 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 CYTH4Q9UIA0 394 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 DOCK9Q9BZ29 2069 aa17.39■□□□□ 0.37
UPF3AP3-201ENST00000420996 KCNU1A8MYU2 1149 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 F5H5T6 163 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 SLC7A4O43246 635 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 TLX3O43711 291 aaPredicted RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 MAGEC1O60732 1142 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 PDGFRAP16234 1089 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 CKMT2P17540 419 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 VASPP50552 380 aaPredicted RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 OXCT1P55809 520 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 YWHAZP63104 245 aaKnown RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 OVGP1Q12889 678 aa17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 EIF4EBP2Q13542 120 aaPredicted RBP17.38■□□□□ 0.37
UPF3AP3-201ENST00000420996 MEA1Q16626 185 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms