RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CAV1Q03135 178 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 SNX1Q13596 522 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 STXBP5Q5T5C0 1151 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 CELF5Q8N6W0 485 aaKnown RBP14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 ZNF557Q8N988 423 aaPredicted RBP14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 ZSCAN18Q8TBC5 510 aaPredicted RBP14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 RSAD2Q8WXG1 361 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 E2F7Q96AV8 911 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 MSLNLQ96KJ4 702 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 PNKPQ96T60 521 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 TMEM121Q9BTD3 319 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 MAGEH1Q9H213 219 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 NOL6Q9H6R4 1146 aaKnown RBP14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 FAM50BQ9Y247 325 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 SH3BP1Q9Y3L3 701 aa14.64□□□□□ -0.07
SHMT1P1-201ENST00000419974 ILVBLA1L0T0 632 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 H7C0C1 242 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 SLC9A3R1O14745 358 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 H2AFXP16104 143 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 GJA1P17302 382 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 CEBPBP17676 345 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 LTBRP36941 435 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 ETFBP38117 255 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 MAGEA6P43360 314 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 ATP5OP48047 213 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 OXCT1P55809 520 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 NTHL1P78549 312 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 GUCY2DQ02846 1103 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 NAA30Q147X3 362 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 PPP1R7Q15435 360 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 ALFQ53S48 1182 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 ATAT1Q5SQI0 421 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 C6orf118Q5T5N4 469 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 PTCRAQ6ISU1 281 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 TIGD7Q6NT04 549 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 DARS2Q6PI48 645 aaKnown RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 PCGF5Q86SE9 256 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 ARID3BQ8IVW6 561 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 NPAS3Q8IXF0 933 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 LGI2Q8N0V4 545 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 C12orf76Q8N812 135 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 HJURPQ8NCD3 748 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 ITFG1Q8TB96 612 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 SH3RF2Q8TEC5 729 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 HTR3CQ8WXA8 447 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 ANKRD7Q92527 254 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 WBP2Q969T9 261 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 PRICKLE1Q96MT3 831 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 NECAB3Q96P71 396 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 EPB41L5Q9HCM4 733 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 SMPD4Q9NXE4 827 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 PAK5Q9P286 719 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 CFAP97Q9P2B7 532 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 TRHDEQ9UKU6 1024 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 MFHAS1Q9Y4C4 1052 aa14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 V9GYY5 206 aaPredicted RBP14.63□□□□□ -0.07
SHMT1P1-201ENST00000419974 GOLGA6L7A0A1B0GV03 622 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 SGK1O00141 431 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 TP73O15350 636 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 CACNG3O60359 315 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 MAFKO60675 156 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 OPHN1O60890 802 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 CNTN5O94779 1100 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 KRT14P02533 472 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 RBL1P28749 1068 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 GGCXP38435 758 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 MTHFRP42898 656 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 VSNL1P62760 191 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 IFI35P80217 286 aaPredicted RBP14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 SLC7A5Q01650 507 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 MPPE1Q53F39 396 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 RARS2Q5T160 578 aaKnown RBP14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 TMCO4Q5TGY1 634 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 HEATR6Q6AI08 1181 aaKnown RBP14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 CES5AQ6NT32 575 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 POTEHQ6S545 545 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 GSTA5Q7RTV2 222 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 ZC3H18Q86VM9 953 aaKnown RBP14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 KLHDC8BQ8IXV7 354 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 MAML1Q92585 1016 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 SMARCD2Q92925 531 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 LRRC45Q96CN5 670 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 TMA16Q96EY4 203 aaKnown RBP14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 P2RY11Q96G91 374 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 CCDC114Q96M63 670 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 RIPOR3Q96MK2 946 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 ZSWIM3Q96MP5 696 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 ASB16Q96NS5 453 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 NECTIN4Q96NY8 510 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 FOXP3Q9BZS1 431 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 PHACTR1Q9C0D0 580 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 TSPYL1Q9H0U9 437 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 NDFIP2Q9NV92 336 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 CLDND1Q9NY35 253 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 MPP6Q9NZW5 540 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 MARK1Q9P0L2 795 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 PRKAG3Q9UGI9 489 aa14.62□□□□□ -0.07
SHMT1P1-201ENST00000419974 CDH7Q9ULB5 785 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms