RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 B3GALNT2Q8NCR0 500 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 PAPOLBQ9NRJ5 636 aaKnown RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 NUDT5Q9UKK9 219 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 ADAMTS6Q9UKP5 1117 aa12.17□□□□□ -0.46
LIMK1-202ENST00000418310 RPL26L1Q9UNX3 145 aaKnown RBP12.17□□□□□ -0.46
LIMK1-202ENST00000418310 YJEFN3A6XGL0 299 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 I6L893 689 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 LIN7AO14910 233 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 BIRC5O15392 142 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 RNASEH1O60930 286 aaKnown RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 MT-CO1P00395 513 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 JCHAINP01591 159 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 LYNP07948 512 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 NFKB1P19838 968 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 FDFT1P37268 417 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 ARCQ7LC44 396 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 GPRIN1Q7Z2K8 1008 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 MYLK4Q86YV6 388 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 APBA2Q99767 749 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 MORF4L1Q9UBU8 362 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 ENO3P13929 434 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 MX2P20592 715 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 GJA5P36382 358 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 MAGEA6P43360 314 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 SNX16P57768 344 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 OR52E8Q6IFG1 317 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 ZNF280DQ6N043 979 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 NOTUMQ6P988 496 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 SLC30A9Q6PML9 568 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 MAMDC4Q6UXC1 1216 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 OTOP3Q7RTS5 596 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 SDCCAG8Q86SQ7 713 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 RNF135Q8IUD6 432 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 ARRDC4Q8NCT1 418 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 FAM156AQ8NDB6 213 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 SPATA22Q8NHS9 363 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 HASPINQ8TF76 798 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 CATSPER2Q96P56 530 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 OLFM3Q96PB7 478 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 GCNAQ96QF7 691 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 FERMT1Q9BQL6 677 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 BFARQ9NZS9 450 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 DCDC2Q9UHG0 476 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 CDH22Q9UJ99 828 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 C2P06681 752 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 SETSIPP0DME0 302 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 GARSP41250 739 aaKnown RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 ZBTB17Q13105 803 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 PDK1Q15118 436 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 SLC25A52Q3SY17 297 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 OTUD1Q5VV17 481 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 PPTC7Q8NI37 304 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 GDPD5Q8WTR4 605 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 ANKRD27Q96NW4 1050 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 LENG8Q96PV6 779 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-202ENST00000418310 S100A14Q9HCY8 104 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 PPP2R3BQ9Y5P8 575 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 BPTFQ12830 3046 aa12.16□□□□□ -0.46
LIMK1-202ENST00000418310 MAGEA13PA6NCF6 341 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 TMEM233B4DJY2 109 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 STX16-NPEPL1H3BU86 382 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 DFFAO00273 331 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 PPP1R12AO14974 1030 aaPredicted RBP12.15□□□□□ -0.46
LIMK1-202ENST00000418310 ITGAXP20702 1163 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 PTPN3P26045 913 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 NMBRP28336 390 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 TAF6P49848 677 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 CCNIQ14094 377 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 POU6F1Q14863 301 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 LINC01465Q8N7H1 131 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 MROH8Q9H579 483 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 UBQLN1Q9UMX0 589 aaKnown RBP12.15□□□□□ -0.46
LIMK1-202ENST00000418310 PTPRFP10586 1907 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 MYOCOSA0A1B0GUC4 107 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 AP1G2O75843 785 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 JUNP05412 331 aaKnown RBP12.15□□□□□ -0.46
LIMK1-202ENST00000418310 NAGLUP54802 743 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 DLG1Q12959 904 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 CTBP1Q13363 440 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 SNX32Q86XE0 403 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 KCTD4Q8WVF5 259 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 POMPQ9Y244 141 aa12.15□□□□□ -0.46
LIMK1-202ENST00000418310 KLHL2O95198 593 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.47
LIMK1-202ENST00000418310 MT-CYBP00156 380 aaPredicted RBP12.15□□□□□ -0.47
LIMK1-202ENST00000418310 MMP3P08254 477 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 AOC1P19801 751 aa12.15□□□□□ -0.47
LIMK1-202ENST00000418310 MRPS22P82650 360 aaKnown RBP12.15□□□□□ -0.47
LIMK1-202ENST00000418310 BEX3Q00994 111 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms