RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 C9IYK1 514 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 C19orf81C9J6K1 198 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 CHADO15335 359 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 ZBTB14O43829 449 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 NFKB1P19838 968 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 ARRB2P32121 409 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 GJA9P57773 515 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 FUT11Q495W5 492 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 DNAL1Q4LDG9 190 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 GALNT15Q8N3T1 639 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 TRIML2Q8N7C3 387 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 FAM81AQ8TBF8 368 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 PABPC5Q96DU9 382 aaKnown RBP13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 ULBP1Q9BZM6 244 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 LMCD1Q9NZU5 365 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 POMPQ9Y244 141 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 C10orf71Q711Q0 1435 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 PLIN3O60664 434 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 ERCC2P18074 760 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 L1CAMP32004 1257 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 AP3M2P53677 418 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 KIF19Q2TAC6 998 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 FSTL4Q6MZW2 842 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 GK5Q6ZS86 529 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 ARMCX2Q7L311 632 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 APPL2Q8NEU8 664 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 NLGN2Q8NFZ4 835 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 HDAC11Q96DB2 347 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 CYP2S1Q96SQ9 504 aa13.49□□□□□ -0.25
TNFRSF8-203ENST00000417814 SAC3D1A6NKF1 404 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 STAMBPO95630 424 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 XRCC1P18887 633 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 NMBRP28336 390 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 ABCE1P61221 599 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 SREK1Q8WXA9 508 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 MCRS1Q96EZ8 462 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 MPHOSPH6Q99547 160 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 OCEL1Q9H607 264 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 LNPEPQ9UIQ6 1025 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 CDH22Q9UJ99 828 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 CRYL1Q9Y2S2 319 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 TCRBV5S1A1TA0A578 114 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 SPATA31D3P0C874 917 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 COX4I1P13073 169 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 FOLH1Q04609 750 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 MPP3Q13368 585 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 TRMT5Q32P41 509 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 SPATA31D4Q6ZUB0 917 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 DHDDSQ86SQ9 333 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 HBEGFQ99075 208 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 SARS2Q9NP81 518 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 ARHGEF4Q9NR80 690 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 DSEQ9UL01 958 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 PCDHGC3Q9UN70 934 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 HNRNPRO43390 633 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 ENDOD1O94919 500 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 MYL3P08590 195 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 GRIA4P48058 902 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 ARL13AQ5H913 290 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 NT5DC4Q86YG4 428 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 MYLK4Q86YV6 388 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 ESAMQ96AP7 390 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 CERS2Q96G23 380 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 GATA5Q9BWX5 397 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 NIFKQ9BYG3 293 aaKnown RBP13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 S100A14Q9HCY8 104 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 EGFL7Q9UHF1 273 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 ATP8B3O60423 1300 aa13.48□□□□□ -0.25
TNFRSF8-203ENST00000417814 A0A088AWK7 358 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 MSI1O43347 362 aaKnown RBP13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 SERPINE1P05121 402 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CYP2C9P11712 490 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 GRM3Q14832 879 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 PDK3Q15120 406 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 KRT80Q6KB66 452 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 XRRA1Q6P2D8 792 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 LBX2Q6XYB7 198 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 ARHGAP36Q6ZRI8 547 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 OR9I1Q8NGQ6 314 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 NMRAL1Q9HBL8 299 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 MPP6Q9NZW5 540 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 PCDHA11Q9Y5I1 949 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 STYXL1Q9Y6J8 313 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 B4GALT4O60513 344 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 GLRA3O75311 464 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CLIC3O95833 236 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 VCLP18206 1134 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 CDH15P55291 814 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 LAMC2Q13753 1193 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 RPS6KA2Q15349 733 aa13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 TARBP2Q15633 366 aaKnown RBP13.47□□□□□ -0.25
TNFRSF8-203ENST00000417814 SLC9A4Q6AI14 798 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms