RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TBC1D3BA6NDS4 549 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 DRGXA6NNA5 263 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF487B1APH4 448 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 I6L893 689 aaPredicted RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 MAN2B1O00754 1011 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 PPP1R12AO14974 1030 aaPredicted RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CST8O60676 142 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 TULP3O75386 442 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 PENKP01210 267 aaPredicted RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 PYGMP11217 842 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 PABPC1P11940 636 aaKnown RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 KRT10P13645 584 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 POLR2EP19388 210 aaKnown RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 TGM2P21980 687 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CXCR5P32302 372 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CTHP32929 405 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 NNMTP40261 264 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 EIF2DP41214 584 aaKnown RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CSKP41240 450 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CDKN2BP42772 138 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 PAFAH1B1P43034 410 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SOX9P48436 509 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 IRAK1P51617 712 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 ST8SIA6P61647 398 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 GNA12Q03113 381 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 GRSF1Q12849 480 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SEMA3BQ13214 749 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SLC12A1Q13621 1099 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 DPYSQ14117 519 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 MLF2Q15773 248 aaPredicted RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 LONRF2Q1L5Z9 754 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SLC44A4Q53GD3 710 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 MANEALQ5VSG8 457 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SUGP1Q8IWZ8 645 aaKnown RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 AHI1Q8N157 1196 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 ATPAF2Q8N5M1 289 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CCNYQ8ND76 341 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CCDC26Q8TAB7 109 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 ALG3Q92685 438 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 P3H4Q92791 437 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 HAUS1Q96CS2 278 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 CAPZA3Q96KX2 299 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 WDR24Q96S15 920 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 OSBPL9Q96SU4 736 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 C2orf49Q9BVC5 232 aaPredicted RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 TLR10Q9BXR5 811 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SP110Q9HB58 689 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 ARHGEF3Q9NR81 526 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 HAUS2Q9NVX0 235 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.69□□□□□ -1.02
TRIM48-201ENST00000417545 MUTYHQ9UIF7 546 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 GGA2Q9UJY4 613 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SLC8A2Q9UPR5 921 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 SAR1BQ9Y6B6 198 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 MYO10Q9HD67 2058 aa8.69□□□□□ -1.02
TRIM48-201ENST00000417545 ILVBLA1L0T0 632 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 WASH4PA8MWX3 477 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 ESPNB1AK53 854 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 H7C0C1 242 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 CBX4O00257 560 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 PGRMC1O00264 195 aaKnown RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 MCF2LO15068 1137 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 MFSD11O43934 449 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 URI1O94763 535 aaPredicted RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 ATP5BP06576 529 aaKnown RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 GLULP15104 373 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 MX2P20592 715 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 HOXC13P31276 330 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 ATP5OP48047 213 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 NUMBP49757 651 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 PEX5P50542 639 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 NDST2P52849 883 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 GEMIN4P57678 1058 aaKnown RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 YBEYP58557 167 aaPredicted RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 PRKCQQ04759 706 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 LMAN2Q12907 356 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 DMC1Q14565 340 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 UBXN2BQ14CS0 331 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 PON2Q15165 354 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 PARP15Q460N3 678 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 C5orf22Q49AR2 442 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 NCBP2-AS2Q69YL0 99 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 RETSATQ6NUM9 610 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF852Q6ZMS4 543 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF783Q6ZMS7 281 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 ADAT2Q7Z6V5 191 aaKnown RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF683Q8IZ20 524 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 SIX5Q8N196 739 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 BBS5Q8N3I7 341 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 TERB1Q8NA31 727 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 TTC13Q8NBP0 860 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 KIF18AQ8NI77 898 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 PCDH19Q8TAB3 1148 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 FIBINQ8TAL6 211 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 FAM3CQ92520 227 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 TSC1Q92574 1164 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 MYEOVQ96EZ4 313 aa8.68□□□□□ -1.02
TRIM48-201ENST00000417545 CELF6Q96J87 481 aaKnown RBP8.68□□□□□ -1.02
TRIM48-201ENST00000417545 NECAB3Q96P71 396 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms