RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 HAUS4Q9H6D7 363 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 PRDM16Q9HAZ2 1276 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■■□□□ 14
HDLBP-206ENST00000417540 ADAM22Q9P0K1 906 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 SLCO3A1Q9UIG8 710 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 ERVW-1Q9UQF0 538 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 OR51B4Q9Y5P0 310 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 SHROOM3Q8TF72 1996 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 ITIH6Q6UXX5 1313 aa10.53□□□□□ -0.72
HDLBP-206ENST00000417540 A0A0D9SEW6 157 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 A0A1W2PQC6 194 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 DCDC2BA2VCK2 349 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 SMTNL1A8MU46 457 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 K7ERQ8 282 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 MID1O15344 667 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 AP5Z1O43299 807 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 RHOCP08134 193 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 FERP16591 822 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 POLR2EP19388 210 aaKnown RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 GPD1P21695 349 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 RFC1P35251 1148 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 NR1I3Q14994 352 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 CA9Q16790 459 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 BRMS1LQ5PSV4 323 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 RABGAP1LQ5R372 815 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 HGSNATQ68CP4 663 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 CYP4V2Q6ZWL3 525 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 TMPRSS6Q8IU80 811 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 MCOLN2Q8IZK6 566 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 STK40Q8N2I9 435 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 ZCCHC9Q8N567 271 aaKnown RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 MSANTD4Q8NCY6 345 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 TTC17Q96AE7 1141 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 ZNF653Q96CK0 615 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 SIPA1Q96FS4 1042 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 SELENOOQ9BVL4 669 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 GPR174Q9BXC1 333 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 XPO4Q9C0E2 1151 aaKnown RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 C6orf106Q9H6K1 298 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 CAAP1Q9H8G2 361 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 DLL3Q9NYJ7 618 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 VPS51Q9UID3 782 aa10.52□□□□□ -0.73
HDLBP-206ENST00000417540 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 KMT2BQ9UMN6 2715 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-206ENST00000417540 IGLV3-10A0A075B6K4 115 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 A0A1W2PP55 124 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 SYNCRIPO60506 623 aaKnown RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 CAVIN2O95810 425 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 MT-CO1P00395 513 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 CTSLP07711 333 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 CD6P30203 668 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 SDC4P31431 198 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 ACSL1P33121 698 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 ACVRL1P37023 503 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 PTPN9P43378 593 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 MAPK8P45983 427 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 PPP2CBP62714 309 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 PPP2CAP67775 309 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 ARF5P84085 180 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 LMNB2Q03252 620 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 PUM1Q14671 1186 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 NFKBIBQ15653 356 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 HNRNPA1L2Q32P51 320 aaKnown RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 C5orf22Q49AR2 442 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 TDRD12Q587J7 1177 aaKnown RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 C9orf64Q5T6V5 341 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 TTC39BQ5VTQ0 682 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 PEAR1Q5VY43 1037 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 RNF219Q5W0B1 726 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 WDR59Q6PJI9 974 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 LEKR1Q6ZMV7 388 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 LPCAT2Q7L5N7 544 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 MMAAQ8IVH4 418 aaKnown RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 AADATQ8N5Z0 425 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 ARFGAP1Q8N6T3 406 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 FRS2Q8WU20 508 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 SNX19Q92543 992 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 ARHGEF26Q96DR7 871 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 BTBD6Q96KE9 485 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 DDX50Q9BQ39 737 aaKnown RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 WDCPQ9H6R7 721 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 WSB2Q9NYS7 404 aaPredicted RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 DAAM1Q9Y4D1 1078 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 AKAP13Q12802 2813 aa10.51□□□□□ -0.73
HDLBP-206ENST00000417540 TPRP12270 2363 aaKnown RBP10.51□□□□□ -0.73
HDLBP-206ENST00000417540 EPG5Q9HCE0 2579 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 CFAP47Q6ZTR5 3102 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 LAMA5O15230 3695 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 MEI4A8MW99 385 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 SMAD6O43541 496 aaKnown RBP10.5□□□□□ -0.73
HDLBP-206ENST00000417540 BNIP3LO60238 219 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 SRGAP2O75044 1071 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 LRP3O75074 770 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 RHOBTB1O94844 696 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 LRIG2O94898 1065 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 CALB1P05937 261 aa10.5□□□□□ -0.73
HDLBP-206ENST00000417540 ZNF806P0C7X5 589 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms