RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CDH5P33151 784 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 SCNN1AP37088 669 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 GRIA4P48058 902 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 FAM193AP78312 1265 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 BNC1Q01954 994 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 ZNF177Q13360 481 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 SUZ12Q15022 739 aaKnown RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 ACBD5Q5T8D3 534 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 CDKAL1Q5VV42 579 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 KIAA0895LQ68EN5 471 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 UNQ6494/PRO21346Q6UXR6 183 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 MMAAQ8IVH4 418 aaKnown RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 C18orf8Q96DM3 657 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 RPL10LQ96L21 214 aaKnown RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 FAM129BQ96TA1 746 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 STK33Q9BYT3 514 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 TM9SF3Q9HD45 589 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 TM7SF3Q9NS93 570 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.1■■□□□ 1.774e-6■□□□□ 10.5
VEGFA-208ENST00000417285 PAXBP1Q9Y5B6 917 aa26.1■■□□□ 1.77
VEGFA-208ENST00000417285 MUC22E2RYF6 1773 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-208ENST00000417285 AKAP13Q12802 2813 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 CLDN11O75508 207 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 KRT37O76014 449 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 TOP3BO95985 862 aaKnown RBP26.09■■□□□ 1.77
VEGFA-208ENST00000417285 ADH1BP00325 375 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 PDGFRAP16234 1089 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 SPINK2P20155 84 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 GABRB2P47870 512 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 GALCP54803 685 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 DBX2Q6ZNG2 339 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 SND1Q7KZF4 910 aaKnown RBP eCLIP26.09■■□□□ 1.774e-9■■□□□ 11.7
VEGFA-208ENST00000417285 ERICH1Q86X53 443 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 PTPRN2Q92932 1015 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 CAMK1GQ96NX5 476 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 NPY6RQ99463 290 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 VPS16Q9H269 839 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 NEUROG2Q9H2A3 272 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 WDCPQ9H6R7 721 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 ANO10Q9NW15 660 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 TPX2Q9ULW0 747 aaKnown RBP26.09■■□□□ 1.77
VEGFA-208ENST00000417285 STAP1Q9ULZ2 295 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 ANKRD6Q9Y2G4 727 aa26.09■■□□□ 1.77
VEGFA-208ENST00000417285 TMEM8BA6NDV4 472 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 MID1O15344 667 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 PAGE1O75459 146 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 RNASEH2AO75792 299 aaKnown RBP26.08■■□□□ 1.77
VEGFA-208ENST00000417285 GOT1P17174 413 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 C5AR1P21730 350 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 MZF1P28698 734 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-208ENST00000417285 CXCR3P49682 368 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 ELAVL3Q14576 367 aaKnown RBP26.08■■□□□ 1.77
VEGFA-208ENST00000417285 KRT31Q15323 416 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 KIF19Q2TAC6 998 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 C5orf22Q49AR2 442 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 BRMS1LQ5PSV4 323 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 CXorf57Q6NSI4 855 aaKnown RBP26.08■■□□□ 1.77
VEGFA-208ENST00000417285 SETD7Q8WTS6 366 aaKnown RBP26.08■■□□□ 1.77
VEGFA-208ENST00000417285 IGSF8Q969P0 613 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 NT5C3BQ969T7 300 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 FEM1AQ9BSK4 669 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 IL21RQ9HBE5 538 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 VANGL2Q9ULK5 521 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 HS3ST4Q9Y661 456 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 IGF2RP11717 2491 aa26.08■■□□□ 1.77
VEGFA-208ENST00000417285 NUMA1Q14980 2115 aa26.08■■□□□ 1.76
VEGFA-208ENST00000417285 F8VZ95 297 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 HYAL3O43820 417 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-208ENST00000417285 LSM8O95777 96 aaKnown RBP26.07■■□□□ 1.76
VEGFA-208ENST00000417285 MBD3O95983 291 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 RNASE9P60153 205 aaKnown RBP26.07■■□□□ 1.76
VEGFA-208ENST00000417285 RACK1P63244 317 aaKnown RBP26.07■■□□□ 1.76
VEGFA-208ENST00000417285 FKBP15Q5T1M5 1219 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 DSG4Q86SJ6 1040 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 GLRX5Q86SX6 157 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 CIR1Q86X95 450 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-208ENST00000417285 STK40Q8N2I9 435 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 KDF1Q8NAX2 398 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-208ENST00000417285 MSANTD4Q8NCY6 345 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 OR2T34Q8NGX1 318 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 SKA1Q96BD8 255 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 PGAP3Q96FM1 320 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-208ENST00000417285 SIK2Q9H0K1 926 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 PCOLCE2Q9UKZ9 415 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 TBC1D30Q9Y2I9 924 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 MSRB2Q9Y3D2 182 aa26.07■■□□□ 1.76
VEGFA-208ENST00000417285 A0A1W2PP55 124 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 FAM221BA6H8Z2 402 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 FAM47DPA6NHR8 397 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 C1QTNF9BB2RNN3 333 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 DFNA5O60443 496 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 CBFA2T3O75081 653 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 IGHV4-34P06331 123 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 C1QTNF9P0C862 333 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 CDH4P55283 916 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 STX1AQ16623 288 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 TAF3Q5VWG9 929 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 ANKRD20A12PQ8NF67 263 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 ALG14Q96F25 216 aa26.06■■□□□ 1.76
VEGFA-208ENST00000417285 C1orf74Q96LT6 269 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms