RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 RPS6KL1Q9Y6S9 549 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 RARAP10276 462 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 THRAP10827 490 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 CCL5P13501 91 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 HDCP19113 662 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 AMPD1P23109 780 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 RGS4P49798 205 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 NCALDP61601 193 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 OXNAD1Q96HP4 312 aaPredicted RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 PAIP1Q9H074 479 aaKnown RBP13.08□□□□□ -0.32
SCAF8-203ENST00000417268 LHX5Q9H2C1 402 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 IL1RL2Q9HB29 575 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 LATS2Q9NRM7 1088 aa13.08□□□□□ -0.32
SCAF8-203ENST00000417268 MYH3P11055 1940 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 S100A5P33763 92 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 NUP107P57740 925 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 GJA9P57773 515 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 PKN2Q16513 984 aaKnown RBP13.07□□□□□ -0.32
SCAF8-203ENST00000417268 MRNIPQ6NTE8 343 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 LRRC8BQ6P9F7 803 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ISLR2Q6UXK2 745 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 BNC2Q6ZN30 1099 aaPredicted RBP13.07□□□□□ -0.32
SCAF8-203ENST00000417268 BCAS3Q9H6U6 928 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 NT5MQ9NPB1 228 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 CRLS1Q9UJA2 301 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 PIGRP01833 764 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 SERPINF2P08697 491 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 GFAPP14136 432 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 WEE1P30291 646 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 SLC10A6Q3KNW5 377 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ZRANB3Q5FWF4 1079 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ANGPTL8Q6UXH0 198 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ADGRE3Q9BY15 652 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 SLC28A3Q9HAS3 691 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 SOX13Q9UN79 622 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 TRAV19A0A0A6YYK7 116 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ARL5CA6NH57 179 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 TSPAN3O60637 253 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 CILPO75339 1184 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 CCND3P30281 292 aaPredicted RBP13.07□□□□□ -0.32
SCAF8-203ENST00000417268 DCTN2Q13561 401 aaKnown RBP13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ATP1A4Q13733 1029 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 LCLAT1Q6UWP7 414 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 GORASP1Q9BQQ3 440 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 DCUN1D5Q9BTE7 237 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 LRRC40Q9H9A6 602 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ADAM28Q9UKQ2 775 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 SLC27A5Q9Y2P5 690 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 MAMDC4Q6UXC1 1216 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 MAGEC3Q8TD91 643 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
SCAF8-203ENST00000417268 ELMO2Q96JJ3 720 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 TRHDEQ9UKU6 1024 aa13.07□□□□□ -0.32
SCAF8-203ENST00000417268 MRPS23Q9Y3D9 190 aaKnown RBP13.07□□□□□ -0.32
SCAF8-203ENST00000417268 TBC1D4O60343 1298 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 ENDOD1O94919 500 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 TBL3Q12788 808 aaKnown RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 C15orf59Q2T9L4 293 aaPredicted RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 SLC45A4Q5BKX6 768 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 PRUNE1Q86TP1 453 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 MON1AQ86VX9 555 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 ZNF513Q8N8E2 541 aaPredicted RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 WDR60Q8WVS4 1066 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 FAXDC2Q96IV6 333 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 GIMAP4Q9NUV9 329 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 OR12D3Q9UGF7 316 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 ADGRA3Q8IWK6 1321 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 AGPSO00116 658 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 FGF10O15520 208 aaPredicted RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 KRT36O76013 467 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 ATG7O95352 703 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 GLUD1P00367 558 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 APOC2P02655 101 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 PBX1P40424 430 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 TCHHL1Q5QJ38 904 aaPredicted RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 ILKAPQ9H0C8 392 aaPredicted RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 EFCAB1Q9HAE3 211 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 TBC1D13Q9NVG8 400 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 VANGL2Q9ULK5 521 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 GABRQQ9UN88 632 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 MEI4A8MW99 385 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 HACD1B0YJ81 288 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 DNM1LO00429 736 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 CLDN5O00501 218 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 TNFAIP8O95379 198 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 ALBP02768 609 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 RAP1GDS1P52306 607 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 LILRA4P59901 499 aa13.06□□□□□ -0.32
SCAF8-203ENST00000417268 MRPS5P82675 430 aaKnown RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
SCAF8-203ENST00000417268 IMPG1Q17R60 797 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms