RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TK2O00142 265 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 PSMA7O14818 248 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 PRLP01236 227 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 GJB1P08034 283 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 FAM228BP0C875 321 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 CD9P21926 228 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 ATN1P54259 1190 aaPredicted RBP20.85■□□□□ 0.93
AP1S3-205ENST00000415298 TPD52P55327 224 aaPredicted RBP20.85■□□□□ 0.93
AP1S3-205ENST00000415298 STX1BP61266 288 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 ZNF568Q3ZCX4 644 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 KCTD20Q7Z5Y7 419 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 CHCHD4Q8N4Q1 142 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 C12orf43Q96C57 262 aaKnown RBP20.85■□□□□ 0.93
AP1S3-205ENST00000415298 FIZ1Q96SL8 496 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 LGALS13Q9UHV8 139 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 GRID1Q9ULK0 1009 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 IQANK1A0A1B0GTG1 560 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 CRTAMO95727 393 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 ASGR1P07306 291 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 CENPAP49450 140 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 DSC3Q14574 896 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 DNAL1Q4LDG9 190 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 BRDTQ58F21 947 aaPredicted RBP20.85■□□□□ 0.93
AP1S3-205ENST00000415298 FAM26FQ5R3K3 315 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 ODR4Q5SWX8 454 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 OGFRL1Q5TC84 451 aaPredicted RBP20.85■□□□□ 0.93
AP1S3-205ENST00000415298 OTOP3Q7RTS5 596 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 PRUNE1Q86TP1 453 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 LRRC57Q8N9N7 239 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 KLHDC9Q8NEP7 349 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 KBTBD7Q8WVZ9 684 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 MAP6Q96JE9 813 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 TTC25Q96NG3 672 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 SPOCK3Q9BQ16 436 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 KIFC3Q9BVG8 833 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 SPC25Q9HBM1 224 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 ANKFY1Q9P2R3 1169 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 EBF1Q9UH73 591 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 RIMKLBQ9ULI2 386 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 KAT6AQ92794 2004 aa20.85■□□□□ 0.93
AP1S3-205ENST00000415298 C8BP07358 591 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 PRKCQQ04759 706 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 MFSD10Q14728 455 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 OASLQ15646 514 aaKnown RBP20.84■□□□□ 0.93
AP1S3-205ENST00000415298 METTL2BQ6P1Q9 378 aaKnown RBP20.84■□□□□ 0.93
AP1S3-205ENST00000415298 GPIHBP1Q8IV16 184 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 SLC25A41Q8N5S1 370 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 SLC7A3Q8WY07 619 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 ZNF668Q96K58 619 aaPredicted RBP20.84■□□□□ 0.93
AP1S3-205ENST00000415298 WNT8AQ9H1J5 351 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 IKZF4Q9H2S9 585 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 COL4A3BPQ9Y5P4 624 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 TRIM77I1YAP6 450 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 ZC3H11AO75152 810 aaKnown RBP eCLIP20.84■□□□□ 0.93
AP1S3-205ENST00000415298 MAFO75444 373 aaPredicted RBP20.84■□□□□ 0.93
AP1S3-205ENST00000415298 TCEA3O75764 348 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 PEX3P56589 373 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 ZNF200P98182 395 aaPredicted RBP20.84■□□□□ 0.93
AP1S3-205ENST00000415298 ZBTB16Q05516 673 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 PPM1LQ5SGD2 360 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 MARCH8Q5T0T0 291 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 FAM91A1Q658Y4 838 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 C11orf96Q7Z7L8 435 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 CLIP4Q8N3C7 705 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 DCUN1D1Q96GG9 259 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 THTPAQ9BU02 230 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 EDEM3Q9BZQ6 932 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 ARHGEF4Q9NR80 690 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 KLF15Q9UIH9 416 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 AP4B1Q9Y6B7 739 aa20.84■□□□□ 0.93
AP1S3-205ENST00000415298 INO80B-WBP1J3KQ70 363 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 PSEN2P49810 448 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 FCHO2Q0JRZ9 810 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 SLC18A3Q16572 532 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 TTC9Q92623 222 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 KRT35Q92764 455 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 PMM1Q92871 262 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 CLPTM1LQ96KA5 538 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.83■□□□□ 0.939e-6■■■■■ 32.4
AP1S3-205ENST00000415298 UCKL1Q9NWZ5 548 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 CORINQ9Y5Q5 1042 aa20.83■□□□□ 0.93
AP1S3-205ENST00000415298 TRIP12Q14669 1992 aaPredicted RBP20.83■□□□□ 0.93
AP1S3-205ENST00000415298 HAS3O00219 553 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 NUAK1O60285 661 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 MAP3K6O95382 1288 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 FGGP02679 453 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 SERPING1P05155 500 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 SMIM10L2AP0DMW4 78 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 SMIM10L2BP0DMW5 78 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 PCNAP12004 261 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 SLC26A3P40879 764 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 NR4A2P43354 598 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 GRIK4Q16099 956 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 SHEQ5VZ18 495 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 CTU1Q7Z7A3 348 aaKnown RBP20.83■□□□□ 0.92
AP1S3-205ENST00000415298 PPM1KQ8N3J5 372 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 SLC15A4Q8N697 577 aa20.83■□□□□ 0.92
AP1S3-205ENST00000415298 BCL7CQ8WUZ0 217 aaPredicted RBP20.83■□□□□ 0.92
AP1S3-205ENST00000415298 TRIT1Q9H3H1 467 aaKnown RBP20.83■□□□□ 0.92
AP1S3-205ENST00000415298 MMRN2Q9H8L6 949 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms