RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ST7Q9NRC1 585 aa14.73□□□□□ -0.05
HLA-DQB2-229ENST00000411527 XPO7Q9UIA9 1087 aaKnown RBP14.73□□□□□ -0.05
HLA-DQB2-229ENST00000411527 DOCK9Q9BZ29 2069 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TLX3O43711 291 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 NNMTP40261 264 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 EIF2S3P41091 472 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 STK19P49842 368 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 NXPH1P58417 271 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 LRRC63Q05C16 580 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ZC3H12AQ5D1E8 599 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 HES3Q5TGS1 186 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 SYPL2Q5VXT5 272 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 RAP1GAP2Q684P5 730 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 LRRC69Q6ZNQ3 347 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TSC1Q92574 1164 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 GSDMAQ96QA5 445 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 GDPD2Q9HCC8 539 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 METTL14Q9HCE5 456 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TJP2Q9UDY2 1190 aa14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TPX2Q9ULW0 747 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CAPN9O14815 690 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 SART1O43290 800 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 APOEP02649 317 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PRB1P04280 392 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 VAV1P15498 845 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TACR2P21452 398 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 MZF1P28698 734 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 RXRGP48443 463 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PPP2CBP62714 309 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PPP2CAP67775 309 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ELAVL3Q14576 367 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 NAPEPLDQ6IQ20 393 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 FBXL19Q6PCT2 694 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 RRAGAQ7L523 313 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 PRPF39Q86UA1 669 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 TAC4Q86UU9 113 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 CHSY1Q86X52 802 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 MFSD2AQ8NA29 543 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 NRSN2Q9GZP1 204 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ERVMER34-1Q9H9K5 563 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 ATP6V1DQ9Y5K8 247 aa14.71□□□□□ -0.05
HLA-DQB2-229ENST00000411527 SMG1Q96Q15 3661 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 PMM2O15305 246 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 RRP8O43159 456 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 LATO43561 262 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 RTN2O75298 545 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SMC2O95347 1197 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 CKMT2P17540 419 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 MAT2AP31153 395 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 DRD3P35462 400 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 GPD2P43304 727 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 RPL34P49207 117 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 METAP1P53582 386 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 CETN1Q12798 172 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 RTP5Q14D33 572 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 CCDC40Q4G0X9 1142 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SFMBT2Q5VUG0 894 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SPATS2Q86XZ4 545 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ARHGEF19Q8IW93 802 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 OXR1Q8N573 874 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 LMO3Q8TAP4 145 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ERCC4Q92889 916 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 BTN2A3PQ96KV6 586 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 PRORYQ9H606 182 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ARHGAP20Q9P2F6 1191 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 RAI2Q9Y5P3 530 aa14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 GCN1Q92616 2671 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ARID1BQ8NFD5 2236 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 F5H5T6 163 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 MAGEC1O60732 1142 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ZIC2O95409 532 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 TRUB2O95900 331 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ACADSBP45954 432 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SULT2A1Q06520 285 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 C19orf57Q0VDD7 668 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ILKQ13418 452 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 STAT4Q14765 748 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ACCSLQ4AC99 568 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 DENND1BQ6P3S1 775 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 BEND5Q7L4P6 421 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 KANSL1Q7Z3B3 1105 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 CIR1Q86X95 450 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 FMR1NBQ8N0W7 255 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 CCAR2Q8N163 923 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ATP6V0D2Q8N8Y2 350 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 EHBP1Q8NDI1 1231 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SLC39A7Q92504 469 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SMARCE1Q969G3 411 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SPAG5Q96R06 1193 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 TRIM62Q9BVG3 475 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 KDM4CQ9H3R0 1056 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SLC12A6Q9UHW9 1150 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 CYTH4Q9UIA0 394 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 SARDHQ9UL12 918 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 BPTFQ12830 3046 aa14.69□□□□□ -0.06
HLA-DQB2-229ENST00000411527 KCNU1A8MYU2 1149 aa14.68□□□□□ -0.06
HLA-DQB2-229ENST00000411527 TK2O00142 265 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms