RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PSTPIP1O43586 416 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 GSTM5P46439 218 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 OTUD3Q5T2D3 398 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ARMC12Q5T9G4 340 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 BHLHE41Q9C0J9 482 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 EPB41L4BQ9H329 900 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 MCUBQ9NWR8 336 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ELOVL2Q9NXB9 296 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 MGRN1O60291 552 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 AGTP01019 485 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 CAP2P40123 477 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 RSBN1Q5VWQ0 802 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 RIPOR1Q6ZS17 1223 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 FBXO33Q7Z6M2 555 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 ARID3BQ8IVW6 561 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 OR52L1Q8NGH7 329 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 GLIS2Q9BZE0 524 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 RACGAP1Q9H0H5 632 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 A1CFQ9NQ94 594 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 BTBD3Q9Y2F9 522 aa11.43□□□□□ -0.58
PRPF40A-202ENST00000410080 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 ADM5C9JUS6 153 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 EPN2O95208 641 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 CYP2C8P10632 490 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 PSMB9P28065 219 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 MRPS35P82673 323 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 SUZ12Q15022 739 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 NFE2Q16621 373 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 TAF2Q6P1X5 1199 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 INTS5Q6P9B9 1019 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 PJA1Q8NG27 643 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 TMEM120AQ9BXJ8 343 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 MRPL9Q9BYD2 267 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 SPATC1LQ9H0A9 340 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 NUDT5Q9UKK9 219 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 A0A1W2PQC6 194 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 BCLAF3A2AJT9 711 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 BTN3A1O00481 513 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 COX7A2P14406 83 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 NFIAQ12857 509 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 LRRC40Q9H9A6 602 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 MCCC2Q9HCC0 563 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 NDRG2Q9UN36 371 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 OGTO15294 1046 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 FBXO21O94952 628 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 RASGRP1O95267 797 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 ZNF7P17097 686 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 ARF4P18085 180 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 USP41Q3LFD5 358 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 LRRC39Q96DD0 335 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 BRD9Q9H8M2 597 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 ABCA9Q8IUA7 1624 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 CD3EAPO15446 510 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 ARP10275 920 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 RABL6Q3YEC7 729 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 COLEC12Q5KU26 742 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 MILR1Q7Z6M3 343 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 F9P00740 461 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 DMTNQ08495 405 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 PDK2Q15119 407 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 GALNTL5Q7Z4T8 443 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 GPSM1Q86YR5 675 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 APBA2Q99767 749 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 HGH1Q9BTY7 390 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 BPIFA1Q9NP55 256 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 A0A0B4J269 797 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 PCCBP05166 539 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 RPLP2P05387 115 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 SRGNP10124 158 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 PLK1P53350 603 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 GRB14Q14449 540 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 IL27RAQ6UWB1 636 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 TMEM138Q9NPI0 162 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 DNAJC16Q9Y2G8 782 aa11.42□□□□□ -0.58
PRPF40A-202ENST00000410080 ISM1B1AKI9 464 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 PSMD11O00231 422 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 MAGEB3O15480 346 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 VDRP11473 427 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 MASP1P48740 699 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 OTUD4Q01804 1114 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 BST2Q10589 180 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 ELAVL2Q12926 359 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 NAB2Q15742 525 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 METTL21CQ5VZV1 264 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 PLEKHA7Q6IQ23 1121 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 TAF8Q7Z7C8 310 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 FBXO39Q8N4B4 442 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 FIBCD1Q8N539 461 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 SYT15Q9BQS2 421 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 MID1IP1Q9NPA3 183 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 LIMD1Q9UGP4 676 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 GLRA3O75311 464 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 H2AFXP16104 143 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 CASP9P55211 416 aa11.41□□□□□ -0.58
PRPF40A-202ENST00000410080 MPPE1Q53F39 396 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms