RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 GLDCP23378 1020 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 DNAJB1P25685 340 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 NPY2RP49146 381 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 SCAPQ12770 1279 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 DCAF6Q58WW2 860 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 RAPH1Q70E73 1250 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 PIP4K2CQ8TBX8 421 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 RDH11Q8TC12 318 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 WNT8BQ93098 351 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 GBP5Q96PP8 586 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 VANGL2Q9ULK5 521 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 SCN4AP35499 1836 aa17.06■□□□□ 0.32
LIMS2-208ENST00000410011 AP3B1O00203 1094 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 EEF2KO00418 725 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 ADCY6O43306 1168 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 UQCRBP14927 111 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 DNAJB2P25686 324 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 PTPN3P26045 913 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 ADSLP30566 484 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 TAF6P49848 677 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 SEMA3BQ13214 749 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 ANKRD20A4Q4UJ75 823 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 FRMD7Q6ZUT3 714 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 CATSPER4Q7RTX7 472 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 STRA8Q7Z7C7 330 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 DEFB107AQ8IZN7 70 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 SLC26A7Q8TE54 656 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 BTBD9Q96Q07 612 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 GORASP1Q9BQQ3 440 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 TRHDEQ9UKU6 1024 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 PRPF19Q9UMS4 504 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 MYO18AQ92614 2054 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 SMIM28A0A1B0GU29 152 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 SPTLC1O15269 473 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 RECQL4O94761 1208 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 NCF2P19878 526 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 ZNF135P52742 658 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 PPIDQ08752 370 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 ADIGQ0VDE8 80 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 KLF10Q13118 480 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 GRM2Q14416 872 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 DLK2Q6UY11 383 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 RSPH3Q86UC2 560 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 PLD6Q8N2A8 252 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 TOP6BLQ8N6T0 577 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 OR52K1Q8NGK4 314 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 PYDC1Q8WXC3 89 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 AZIN2Q96A70 460 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 FAM149B1Q96BN6 582 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 VAT1Q99536 393 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 ADARB2Q9NS39 739 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 SETD4Q9NVD3 440 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 PIH1D1Q9NWS0 290 aaKnown RBP17.05■□□□□ 0.32
LIMS2-208ENST00000410011 VPS28Q9UK41 221 aa17.05■□□□□ 0.32
LIMS2-208ENST00000410011 A0A096LPK6 155 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 C9IYK1 514 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 HSPA4LO95757 839 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 UBTFL6P0CB48 400 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 ADRA1BP35368 520 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 GJA9P57773 515 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 TBL3Q12788 808 aaKnown RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 SV2CQ496J9 727 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 VWA5B1Q5TIE3 1220 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 BSPRYQ5W0U4 402 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 CMC1Q7Z7K0 106 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 TMEM126BQ8IUX1 230 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 PHTF2Q8N3S3 785 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 ZNF781Q8N8C0 355 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 B3GALNT2Q8NCR0 500 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 URGCPQ8TCY9 931 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 TUBGCP5Q96RT8 1024 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 EBF3Q9H4W6 596 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 PIDD1Q9HB75 910 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 NMRAL1Q9HBL8 299 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 ZNF358Q9NW07 568 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 OXSMQ9NWU1 459 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 NSMCE4AQ9NXX6 385 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 SEPT10Q9P0V9 454 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 KLHL8Q9P2G9 620 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 ADAMTS6Q9UKP5 1117 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 ANKRD6Q9Y2G4 727 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 EME2A4GXA9 379 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 F5H423 210 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 M0QYT0 321 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 DCXO43602 365 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 THRAP10827 490 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 NPR3P17342 541 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 CYP2B6P20813 491 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 EPHB1P54762 984 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 MED21Q13503 144 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 CFAP157Q5JU67 520 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 GLRA4Q5JXX5 417 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 NCSTNQ92542 709 aa17.04■□□□□ 0.32
LIMS2-208ENST00000410011 ZNF669Q96BR6 464 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-208ENST00000410011 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms