RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 KLHL11Q9NVR0 708 aa10.94□□□□□ -0.66
CCDC148-203ENST00000409889 ITIH6Q6UXX5 1313 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 CCDC187A0A096LP49 1063 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 CPED1A4D0V7 1026 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 NEMP2A6NFY4 417 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 LRRIQ3A6PVS8 624 aaPredicted RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 K7ESM1 405 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 SCAMP1O15126 338 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 EIF3DO15371 548 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 TCEA3O75764 348 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 LATS1O95835 1130 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 C4BPAP04003 597 aaKnown RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 TXLNAP40222 546 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 STAT6P42226 847 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 CTSOP43234 321 aaPredicted RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 AP3M2P53677 418 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 FOXK1P85037 733 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 INCA1Q0VD86 236 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 ZNF177Q13360 481 aaPredicted RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 ELAVL3Q14576 367 aaKnown RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 TGIF1Q15583 401 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 IGFBP7Q16270 282 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 TBR1Q16650 682 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 CDKN3Q16667 212 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 SGSM1Q2NKQ1 1148 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 MPP7Q5T2T1 576 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 HIST2H2BCQ6DN03 193 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 SPOPLQ6IQ16 392 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 GUSBP11Q6P575 273 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 EFL1Q7Z2Z2 1120 aaKnown RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 PTRH1Q86Y79 214 aaKnown RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 FAM131CQ96AQ9 280 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 LMLNQ96KR4 655 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 NT5C1AQ9BXI3 368 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 OLA1Q9NTK5 396 aaKnown RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 STIM2Q9P246 746 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 SFMBT1Q9UHJ3 866 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 INTS6Q9UL03 887 aaKnown RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 ERVW-1Q9UQF0 538 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
CCDC148-203ENST00000409889 CEP83Q9Y592 693 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 ABCA12Q86UK0 2595 aa10.93□□□□□ -0.66
CCDC148-203ENST00000409889 SLC7A4O43246 635 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 MSI1O43347 362 aaKnown RBP10.92□□□□□ -0.66
CCDC148-203ENST00000409889 NOBOXO60393 691 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 SRPRAP08240 638 aaKnown RBP10.92□□□□□ -0.66
CCDC148-203ENST00000409889 SLC5A2P31639 672 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 PDX1P52945 283 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 SKIDA1Q1XH10 827 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 PITRM1Q5JRX3 1037 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 PIK3R6Q5UE93 754 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 CRYBG3Q68DQ2 2970 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 ZCCHC8Q6NZY4 707 aaKnown RBP10.92□□□□□ -0.66
CCDC148-203ENST00000409889 CCDC73Q6ZRK6 1079 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 EPM2AIP1Q7L775 607 aaPredicted RBP10.92□□□□□ -0.66
CCDC148-203ENST00000409889 C14orf80Q86SX3 495 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 NELFCDQ8IXH7 590 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 TMEM145Q8NBT3 493 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 OR13H1Q8NG92 308 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 TPCN2Q8NHX9 752 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 FIBINQ8TAL6 211 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 ZNF507Q8TCN5 953 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 PARD3BQ8TEW8 1205 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 PTPRN2Q92932 1015 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 GEMIN8Q9NWZ8 242 aaKnown RBP10.92□□□□□ -0.66
CCDC148-203ENST00000409889 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 LRRK1Q38SD2 2015 aa10.92□□□□□ -0.66
CCDC148-203ENST00000409889 FBN2P35556 2912 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 GOLGA6L7A0A1B0GV03 622 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 SLC31A1O15431 190 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 EXOC3O60645 756 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 RNGTTO60942 597 aaKnown RBP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 ASS1P00966 412 aaKnown RBP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 VAV1P15498 845 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 PRLRP16471 622 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 SLC6A4P31645 630 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 CCR10P46092 362 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 HNRNPKP61978 463 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 CYP4F2P78329 520 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 CLDN10P78369 228 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 CDH18Q13634 790 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 DRAP1Q14919 205 aaPredicted RBP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 CLCA4Q14CN2 919 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 FAM133BQ5BKY9 247 aaKnown RBP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 ZNF542PQ5EBM4 170 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 RAB41Q5JT25 222 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 AGBL4Q5VU57 503 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 RNF219Q5W0B1 726 aaPredicted RBP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 MMS22LQ6ZRQ5 1243 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 PIGZQ86VD9 579 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 JAMLQ86YT9 394 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 SLC22A18ASQ8N1D0 253 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 CARNMT1Q8N4J0 409 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 ZSCAN1Q8NBB4 408 aa10.91□□□□□ -0.66
CCDC148-203ENST00000409889 ZNF548Q8NEK5 533 aaPredicted RBP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 ZNF564Q8TBZ8 553 aaPredicted RBP10.91□□□□□ -0.66
CCDC148-203ENST00000409889 RNF139Q8WU17 664 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms