RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FAM221BA6H8Z2 402 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 FAM47DPA6NHR8 397 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 FOXN3O00409 490 aaPredicted RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 DFNA5O60443 496 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 CBFA2T3O75081 653 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 GRAP2O75791 330 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 ERBB2P04626 1255 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 PDGFRAP16234 1089 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 C5AR1P21730 350 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 SLC8A1P32418 973 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 PSMD8P48556 350 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 RACK1P63244 317 aaKnown RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 NME3Q13232 169 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 KIF19Q2TAC6 998 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 FBXL22Q6P050 247 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 SND1Q7KZF4 910 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■□□□ 13
CBX3-203ENST00000409747 DSG4Q86SJ6 1040 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 ADAMTS14Q8WXS8 1223 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 RPL10LQ96L21 214 aaKnown RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 ACE2Q9BYF1 805 aaPredicted RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 NUP62CLQ9H1M0 184 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 SLCO3A1Q9UIG8 710 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 SLC25A13Q9UJS0 675 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 AJAP1Q9UKB5 411 aaPredicted RBP15.2■□□□□ 0.02
CBX3-203ENST00000409747 ZMIZ1Q9ULJ6 1067 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 STAP1Q9ULZ2 295 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 SNX11Q9Y5W9 270 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 AKAP13Q12802 2813 aa15.2■□□□□ 0.02
CBX3-203ENST00000409747 CFAP47Q6ZTR5 3102 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 M0QYT0 321 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 IGHV4-34P06331 123 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 GOT1P17174 413 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 CLCN1P35523 988 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
CBX3-203ENST00000409747 CCT8P50990 548 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 GALCP54803 685 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 C21orf59P57076 290 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 AUHQ13825 339 aaKnown RBP15.19■□□□□ 0.02
CBX3-203ENST00000409747 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 INAVAQ3KP66 663 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 PTPN20Q4JDL3 420 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 CT47A1Q5JQC4 288 aaPredicted RBP15.19■□□□□ 0.02
CBX3-203ENST00000409747 CXorf57Q6NSI4 855 aaKnown RBP15.19■□□□□ 0.02
CBX3-203ENST00000409747 CIR1Q86X95 450 aaPredicted RBP15.19■□□□□ 0.02
CBX3-203ENST00000409747 CHCHD4Q8N4Q1 142 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 MSANTD4Q8NCY6 345 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 SPAG5Q96R06 1193 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 VANGL2Q9ULK5 521 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 SLCO1B1Q9Y6L6 691 aa15.19■□□□□ 0.02
CBX3-203ENST00000409747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.18■□□□□ 0.02
CBX3-203ENST00000409747 A0A1W2PPC4 97 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 PES1O00541 588 aaKnown RBP15.18■□□□□ 0.02
CBX3-203ENST00000409747 CLDN11O75508 207 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 IL1BP01584 269 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 MZF1P28698 734 aaPredicted RBP15.18■□□□□ 0.02
CBX3-203ENST00000409747 SCNN1AP37088 669 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 STK19P49842 368 aaPredicted RBP15.18■□□□□ 0.02
CBX3-203ENST00000409747 ZNF177Q13360 481 aaPredicted RBP15.18■□□□□ 0.02
CBX3-203ENST00000409747 MIIPQ5JXC2 388 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 BRMS1LQ5PSV4 323 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 ACBD5Q5T8D3 534 aaPredicted RBP15.18■□□□□ 0.02
CBX3-203ENST00000409747 NCEH1Q6PIU2 408 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 DBX2Q6ZNG2 339 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 STK40Q8N2I9 435 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 RHBDD1Q8TEB9 315 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 ZCCHC14Q8WYQ9 949 aaKnown RBP15.18■□□□□ 0.02
CBX3-203ENST00000409747 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.18■□□□□ 0.024e-9■□□□□ 8.8
CBX3-203ENST00000409747 SERGEFQ9UGK8 458 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 HS3ST4Q9Y661 456 aa15.18■□□□□ 0.02
CBX3-203ENST00000409747 VILLO15195 856 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 PCDHGA12O60330 932 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 F9P00740 461 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 EEF1GP26641 437 aaKnown RBP15.17■□□□□ 0.02
CBX3-203ENST00000409747 CDH5P33151 784 aaPredicted RBP15.17■□□□□ 0.02
CBX3-203ENST00000409747 GRK6P43250 576 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 CCR5P51681 352 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 ADPRHP54922 357 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 CDH4P55283 916 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 CENPCQ03188 943 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 DRAP1Q14919 205 aaPredicted RBP15.17■□□□□ 0.02
CBX3-203ENST00000409747 BAHD1Q8TBE0 780 aaPredicted RBP15.17■□□□□ 0.02
CBX3-203ENST00000409747 FAM129BQ96TA1 746 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 ORAI3Q9BRQ5 295 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 VPS28Q9UK41 221 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 ALOX15BO15296 676 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 ZZEF1O43149 2961 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 PAGE1O75459 146 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 LSM8O95777 96 aaKnown RBP15.17■□□□□ 0.02
CBX3-203ENST00000409747 PNMA6AP0CW24 399 aaPredicted RBP15.17■□□□□ 0.02
CBX3-203ENST00000409747 CYP11B1P15538 503 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 CTSKP43235 329 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 SULT1E1P49888 294 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 KCNJ12Q14500 433 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 C5orf22Q49AR2 442 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 KLHDC7AQ5VTJ3 777 aa15.17■□□□□ 0.02
CBX3-203ENST00000409747 FAM46CQ5VWP2 391 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms