RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZNF557Q8N988 423 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 TSC1Q92574 1164 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 EXOC4Q96A65 974 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 FAF2Q96CS3 445 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 PRICKLE1Q96MT3 831 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 CSPG4P5Q96PW8 444 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 MARK1Q9P0L2 795 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 SNX12Q9UMY4 172 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 CACNA1HO95180 2353 aa16.99■□□□□ 0.31
TSPAN4-208ENST00000409531 CES2O00748 559 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 TBL1XO60907 577 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 CLDN11O75508 207 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 CD48P09326 243 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 PYGMP11217 842 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 ZFXP17010 805 aaPredicted RBP16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 RHOQP17081 205 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 CDKN2BP42772 138 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 GALK1P51570 392 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 CDH4P55283 916 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 GAD2Q05329 585 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 DPYSQ14117 519 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 DHCR24Q15392 516 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 TAZQ16635 292 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 ANKRD20A8PQ5CZ79 823 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 DGKKQ5KSL6 1271 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 LY6G5CQ5SRR4 150 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 IGSF8Q969P0 613 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 CHFRQ96EP1 664 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 RNF157Q96PX1 679 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 BBS2Q9BXC9 721 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 NUP205Q92621 2012 aa16.98■□□□□ 0.31
TSPAN4-208ENST00000409531 WASH4PA8MWX3 477 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 CYP17A1P05093 508 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 ADH5P11766 374 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 IL4RP24394 825 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 SERPINB6P35237 376 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 MAPKAPK2P49137 400 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 RPS24P62847 133 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 GRSF1Q12849 480 aaKnown RBP eCLIP16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 MMRN1Q13201 1228 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 LRRC32Q14392 662 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 ANO4Q32M45 955 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 DCAF12L1Q5VU92 463 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 RHBDF2Q6PJF5 856 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 MAMSTRQ6ZN01 415 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 TMEM25Q86YD3 366 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 RFX6Q8HWS3 928 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 SYNPOQ8N3V7 929 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 LZTR1Q8N653 840 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 RTL3Q8N8U3 475 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 OSBPL9Q96SU4 736 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 PSMB7Q99436 277 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 IER2Q9BTL4 223 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 OSBPL8Q9BZF1 889 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 CHRDQ9H2X0 955 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 ARHGEF4Q9NR80 690 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 TMEM248Q9NWD8 314 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 SPATA6Q9NWH7 488 aaPredicted RBP16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 MPP6Q9NZW5 540 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 NEU3Q9UQ49 428 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 SAR1BQ9Y6B6 198 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 CHD5Q8TDI0 1954 aa16.97■□□□□ 0.31
TSPAN4-208ENST00000409531 hCG_1818297A0A087WSY0 165 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 NEDD8-MDP1E9PL57 170 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 HOXC11O43248 304 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 TJP3O95049 919 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 PENKP01210 267 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 TYRP14679 529 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 ERCC2P18074 760 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 OXCT1P55809 520 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 ZNF177Q13360 481 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 ZNF211Q13398 564 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 CCINQ13939 588 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 FYB2Q5VWT5 728 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 TMCO3Q6UWJ1 677 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 NLRP14Q86W24 1093 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 CFAP52Q8N1V2 620 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 KIF18AQ8NI77 898 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 XPO6Q96QU8 1125 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 NAP1L3Q99457 506 aaPredicted RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 FBRSL1Q9HCM7 1045 aaKnown RBP16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 CACNA1IQ9P0X4 2223 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 MIA3Q5JRA6 1907 aa16.96■□□□□ 0.31
TSPAN4-208ENST00000409531 H0Y626 953 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 APOL1O14791 398 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 DCLK1O15075 740 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 LAMTOR5O43504 91 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 CEP104O60308 925 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 CNTN5O94779 1100 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 LUC7L3O95232 432 aaKnown RBP16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 DRD1P21728 446 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 AMPD1P23109 780 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 HOXD9P28356 352 aaPredicted RBP16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 OR1E1P30953 314 aa16.96■□□□□ 0.3
TSPAN4-208ENST00000409531 CXCR5P32302 372 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms