RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 NOCTQ9UK39 431 aaKnown RBP19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 SNX10Q9Y5X0 201 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 CABIN1Q9Y6J0 2220 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 KMT2BQ9UMN6 2715 aaPredicted RBP19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 EDDM13A0A1B0GTR0 161 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 UPK3BL1B0FP48 263 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 UPK3BL2E5RIL1 263 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 GOLGA8SH3BPF8 625 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 MID1O15344 667 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 GJB3O75712 270 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 LSM8O95777 96 aaKnown RBP19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 VAV1P15498 845 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 FLT3P36888 993 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 NOMO3P69849 1222 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 SHC2P98077 582 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 BNC1Q01954 994 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 SLC12A1Q13621 1099 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 CST6Q15828 149 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 NAA35Q5VZE5 725 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 SASS6Q6UVJ0 657 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 GANCQ8TET4 914 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 BIRC7Q96CA5 298 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 ALG14Q96F25 216 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 SLC32A1Q9H598 525 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 WDCPQ9H6R7 721 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 FBXL12Q9NXK8 326 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 ARHGEF38Q9NXL2 777 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 RRN3Q9NYV6 651 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 STAP1Q9ULZ2 295 aa19.87■□□□□ 0.77
SMARCB1-204ENST00000407422 USP24Q9UPU5 2620 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 TARSL2A2RTX5 802 aaKnown RBP19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 RNASEH1O60930 286 aaKnown RBP19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 PLK1P53350 603 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 JAM2P57087 298 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 SLC25A52Q3SY17 297 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 STK40Q8N2I9 435 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 PGAP3Q96FM1 320 aaPredicted RBP19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 FEM1AQ9BSK4 669 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 SGK2Q9HBY8 427 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 ANO10Q9NW15 660 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 SIK3Q9Y2K2 1263 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 TMEM131Q92545 1883 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 DOCK4Q8N1I0 1966 aa19.86■□□□□ 0.77
SMARCB1-204ENST00000407422 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 SPAARA0A1B0GVQ0 90 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 A0A1W2PP55 124 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 CNTN5O94779 1100 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 FSBPO95073 299 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 TOP3BO95985 862 aaKnown RBP19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 CHRNB2P17787 502 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 SCNN1AP37088 669 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 CSNK1EP49674 416 aaKnown RBP19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 COPB1P53618 953 aaKnown RBP19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 FAM193AP78312 1265 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 DEUP1Q05D60 604 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 FOXC1Q12948 553 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 MTA1Q13330 715 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 ZNF177Q13360 481 aaPredicted RBP19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 C5orf22Q49AR2 442 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 FKBP15Q5T1M5 1219 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 USP30Q70CQ3 517 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 CAMK1GQ96NX5 476 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 NEUROG2Q9H2A3 272 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 IL21RQ9HBE5 538 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 TMEM59LQ9UK28 342 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 OR51B4Q9Y5P0 310 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 PLXNA2O75051 1894 aa19.85■□□□□ 0.77
SMARCB1-204ENST00000407422 FAM47DPA6NHR8 397 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 GOLGA6L22H0YM25 854 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 TPM2P07951 284 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SLC8A1P32418 973 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SOX5P35711 763 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 PSMD8P48556 350 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 FMO1Q01740 532 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 MYL5Q02045 173 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SULT2A1Q06520 285 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SYCP1Q15431 976 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 STX1AQ16623 288 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 ALFQ53S48 1182 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 BRMS1LQ5PSV4 323 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 ZNF683Q8IZ20 524 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 FRS2Q8WU20 508 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 CFAP57Q96MR6 1250 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 ZDHHC5Q9C0B5 715 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SCML1Q9UN30 329 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 WASF3Q9UPY6 502 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 NCKAP1Q9Y2A7 1128 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 A0A1B0GVT2 93 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SH3BP5O60239 455 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 CLDN11O75508 207 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 RNASEH2AO75792 299 aaKnown RBP19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 F9P00740 461 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 IGHV4-34P06331 123 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 ZNF18P17022 549 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SPINK2P20155 84 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 NNMTP40261 264 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 GALCP54803 685 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 OXCT1P55809 520 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 CDR2Q01850 454 aa19.84■□□□□ 0.77
SMARCB1-204ENST00000407422 SND1Q7KZF4 910 aaKnown RBP eCLIP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms