RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ANKRD42Q8N9B4 389 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 FAF2Q96CS3 445 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 ACSS3Q9H6R3 686 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 PCDH18Q9HCL0 1135 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 TMEM51Q9NW97 253 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 TJP2Q9UDY2 1190 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 STAP1Q9ULZ2 295 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 CAPN7Q9Y6W3 813 aa13.28□□□□□ -0.28
SMARCB1-203ENST00000407082 TCP11X1B4DZS4 312 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 H7C4K7 107 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 TRIM66O15016 1216 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 LILRB3O75022 631 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 FBXO21O94952 628 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 OAZ2O95190 189 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 ADH1AP07327 375 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 LAMP2P13473 410 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 IFNAR2P48551 515 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 RGS7P49802 495 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 ZNF135P52742 658 aaPredicted RBP13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 MRPL58Q14197 206 aaKnown RBP13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 PSMD5Q16401 504 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 DPYSL2Q16555 572 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 QPCTQ16769 361 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 CDO1Q16878 200 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 HHATQ5VTY9 493 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 OVOS1Q6IE37 1185 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 RGS9BPQ6ZS82 235 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 C3orf62Q6ZUJ4 267 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 LIMS2Q7Z4I7 341 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 TTC30AQ86WT1 665 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 UNC45BQ8IWX7 931 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 GPR65Q8IYL9 337 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 THEM5Q8N1Q8 247 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 PLD5Q8N7P1 536 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 FAM71DQ8N9W8 422 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 MCUQ8NE86 351 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 CENPIQ92674 756 aaPredicted RBP13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 HNRNPABQ99729 332 aaKnown RBP13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 ELAC2Q9BQ52 826 aaKnown RBP13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 RTKNQ9BST9 563 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 PNPLA8Q9NP80 782 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 HAUS2Q9NVX0 235 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 KLHL14Q9P2G3 628 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 TBK1Q9UHD2 729 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 DPP7Q9UHL4 492 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 ARL2BPQ9Y2Y0 163 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 RAD54BQ9Y620 910 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 NUMBLQ9Y6R0 609 aa13.27□□□□□ -0.29
SMARCB1-203ENST00000407082 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 VWA8A3KMH1 1905 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 CFAP73A6NFT4 308 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 FAM170BA6NMN3 283 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 TM9SF1O15321 606 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 SNX3O60493 162 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 GLUD1P00367 558 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 ALDH3A1P30838 453 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 FDFT1P37268 417 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 MAGEA6P43360 314 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 LHX1P48742 406 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 ATP11AP98196 1134 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 CDK16Q00536 496 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 CREMQ03060 361 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 C15orf59Q2T9L4 293 aaPredicted RBP13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 BBS9Q3SYG4 887 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 CTXN3Q4LDR2 81 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 NUGGCQ68CJ6 796 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 ADGRF2Q8IZF7 708 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 C12orf29Q8N999 325 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 GLIS1Q8NBF1 620 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 FBXO36Q8NEA4 188 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 MGARPQ8TDB4 240 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 KCTD13Q8WZ19 329 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 CCT6BQ92526 530 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 CLSTN3Q9BQT9 956 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 SNRNP25Q9BV90 132 aaKnown RBP13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 DUSP16Q9BY84 665 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 RXFP1Q9HBX9 757 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 FAM49BQ9NUQ9 324 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 FNIP2Q9P278 1114 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 MTRRQ9UBK8 725 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 RABGEF1Q9UJ41 708 aa13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 MTF2Q9Y483 593 aaPredicted RBP13.26□□□□□ -0.29
SMARCB1-203ENST00000407082 KANSL1LA0AUZ9 987 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 H3BRJ5 948 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 TEX28O15482 410 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 KCNN4O15554 427 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 DAB1O75553 588 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 GCATO75600 419 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 DNAJC8O75937 253 aaPredicted RBP13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 ATP5HO75947 161 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 INHBAP08476 426 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 ADRB1P08588 477 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 CD48P09326 243 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms