RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 MOSPD3O75425 235 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 APRTP07741 180 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 RHOP08100 348 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 RHOQP17081 205 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 PTPN3P26045 913 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 NRIP1P48552 1158 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 SLC11A2P49281 568 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 PAPOLAP51003 745 aaKnown RBP17.32■□□□□ 0.36
IRF1-202ENST00000405885 MSS51Q4VC12 460 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 GRASPQ7Z6J2 395 aaPredicted RBP17.32■□□□□ 0.36
IRF1-202ENST00000405885 PPIL6Q8IXY8 311 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 ZCCHC9Q8N567 271 aaKnown RBP17.32■□□□□ 0.36
IRF1-202ENST00000405885 BBOF1Q8ND07 529 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 OR52K2Q8NGK3 314 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 USP33Q8TEY7 942 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 SPATA13Q96N96 652 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 AGAP3Q96P47 875 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 RBM15Q96T37 977 aaKnown RBP eCLIP17.32■□□□□ 0.36
IRF1-202ENST00000405885 SLC28A3Q9HAS3 691 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 TMEM248Q9NWD8 314 aa17.32■□□□□ 0.36
IRF1-202ENST00000405885 NYNRINQ9P2P1 1898 aaKnown RBP17.31■□□□□ 0.36
IRF1-202ENST00000405885 GOLGA6BA6NDN3 693 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 ATP8B1O43520 1251 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 MAFKO60675 156 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 MX2P20592 715 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 HTR7P34969 479 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 KCNJ11Q14654 390 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 TEAD2Q15562 447 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 FNBP1LQ5T0N5 605 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 AFMIDQ63HM1 303 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 ARHGEF18Q6ZSZ5 1173 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 IQCKQ8N0W5 287 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 VN1R2Q8NFZ6 395 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 ZSCAN18Q8TBC5 510 aaPredicted RBP17.31■□□□□ 0.36
IRF1-202ENST00000405885 BHMTQ93088 406 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 SAMD11Q96NU1 681 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 CDC42EP4Q9H3Q1 356 aaKnown RBP17.31■□□□□ 0.36
IRF1-202ENST00000405885 NOTCH4Q99466 2003 aa17.31■□□□□ 0.36
IRF1-202ENST00000405885 CCDC195A0A1B0GUA6 201 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 NCAM2O15394 837 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 OR1E1P30953 314 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 GRIA1P42261 906 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 CAV1Q03135 178 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 TNS4Q8IZW8 715 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 ATPAF2Q8N5M1 289 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 RIN3Q8TB24 985 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 C9orf72Q96LT7 481 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 TLE6Q9H808 572 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 VIPAS39Q9H9C1 493 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 MSRAQ9UJ68 235 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 CDH22Q9UJ99 828 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 SHOC2Q9UQ13 582 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 PLAAQ9Y263 795 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 DENND4CQ5VZ89 1909 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 BPTFQ12830 3046 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 WASH4PA8MWX3 477 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 H3BQF6 201 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 ACSL3O95573 720 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 SHBGP04278 402 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 PSMB4P28070 264 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 CDC25CP30307 473 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 OLIG2Q13516 323 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 KYNUQ16719 465 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 ADGRF1Q5T601 910 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 CFAP58Q5T655 872 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 LEKR1Q6ZMV7 388 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 PID1Q7Z2X4 250 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 CCDC13Q8IYE1 715 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 ZNF707Q96C28 371 aaPredicted RBP17.3■□□□□ 0.36
IRF1-202ENST00000405885 GORASP1Q9BQQ3 440 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 WDR83Q9BRX9 315 aaKnown RBP17.3■□□□□ 0.36
IRF1-202ENST00000405885 TMEM51Q9NW97 253 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 PIH1D1Q9NWS0 290 aaKnown RBP17.3■□□□□ 0.36
IRF1-202ENST00000405885 RAD54BQ9Y620 910 aa17.3■□□□□ 0.36
IRF1-202ENST00000405885 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.29■□□□□ 0.36
IRF1-202ENST00000405885 A0A0D9SEW6 157 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 J3KR12 359 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 ZBTB24O43167 697 aaPredicted RBP17.29■□□□□ 0.36
IRF1-202ENST00000405885 JCHAINP01591 159 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 PTPN2P17706 415 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 CD68P34810 354 aaPredicted RBP17.29■□□□□ 0.36
IRF1-202ENST00000405885 ACVRL1P37023 503 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 SLC29A2Q14542 456 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 CBX2Q14781 532 aaPredicted RBP17.29■□□□□ 0.36
IRF1-202ENST00000405885 GPR158Q5T848 1215 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 TMC5Q6UXY8 1006 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 UMODL1-AS1Q8N2C9 162 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 ING5Q8WYH8 240 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 FAM129AQ9BZQ8 928 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 PABPC3Q9H361 631 aaKnown RBP17.29■□□□□ 0.36
IRF1-202ENST00000405885 SAYSD1Q9NPB0 183 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 FAM53CQ9NYF3 392 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 CFAP97Q9P2B7 532 aa17.29■□□□□ 0.36
IRF1-202ENST00000405885 KLHL8Q9P2G9 620 aaPredicted RBP17.29■□□□□ 0.36
IRF1-202ENST00000405885 RASA4BC9J798 803 aa17.28■□□□□ 0.36
IRF1-202ENST00000405885 RASA4O43374 803 aa17.28■□□□□ 0.36
IRF1-202ENST00000405885 RRP9O43818 475 aaKnown RBP17.28■□□□□ 0.36
IRF1-202ENST00000405885 EPHA5P54756 1037 aa17.28■□□□□ 0.36
IRF1-202ENST00000405885 PCGF5Q86SE9 256 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms