RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 SEMA4DQ92854 862 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 A1CFQ9NQ94 594 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 UTP6Q9NYH9 597 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 SYNCRIPO60506 623 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 SNRPB2P08579 225 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 CDC25CP30307 473 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 SMARCD1Q96GM5 515 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 OSBPL11Q9BXB4 747 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 REXO4Q9GZR2 422 aaKnown RBP13.59□□□□□ -0.23
SNED1-205ENST00000405547 ANAPC2Q9UJX6 822 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 CROCCQ5TZA2 2017 aa13.59□□□□□ -0.23
SNED1-205ENST00000405547 A0A087WZ62 844 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 PPP2R1BP30154 601 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 ZNF143P52747 638 aaPredicted RBP13.58□□□□□ -0.23
SNED1-205ENST00000405547 PKNOX1P55347 436 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 RGS21Q2M5E4 152 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 TRIQKQ629K1 86 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 TRABD2AQ86V40 505 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 LNX1Q8TBB1 728 aaPredicted RBP13.58□□□□□ -0.23
SNED1-205ENST00000405547 TBL1YQ9BQ87 522 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 FDXACB1Q9BRP7 624 aaPredicted RBP13.58□□□□□ -0.23
SNED1-205ENST00000405547 CCDC28BQ9BUN5 200 aa13.58□□□□□ -0.23
SNED1-205ENST00000405547 CENPXA8MT69 81 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 HS6ST1O60243 411 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 ZBTB7AO95365 584 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 DLG4P78352 724 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 CDC16Q13042 620 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 TOP3AQ13472 1001 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 GJC2Q5T442 439 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 ABRAXAS1Q6UWZ7 409 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 BNIPLQ7Z465 357 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 B3GALNT2Q8NCR0 500 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 MKL1Q969V6 931 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 GSTM1P09488 218 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 SOX10P56693 466 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 BST1Q10588 318 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 TRAF3Q13114 568 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 METTL6Q8TCB7 284 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 POP5Q969H6 163 aaKnown RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 ACOX2Q99424 681 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 COLEC11Q9BWP8 271 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 CDH8P55286 799 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 CAMK2GQ13555 558 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 UTP15Q8TED0 518 aaKnown RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 E5RJQ4 531 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 RAMP2O60895 175 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 PSMA3P25788 255 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 GPC1P35052 558 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 PORCNQ9H237 461 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 MIEF1Q9NQG6 463 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 C8orf4Q9NR00 106 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 TK2O00142 265 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 WBP4O75554 376 aaKnown RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 EGFRP00533 1210 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 FMO1Q01740 532 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 LACTB2Q53H82 288 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 STARD8Q92502 1023 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 KRT36O76013 467 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 COX4I1P13073 169 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 NAGLUP54802 743 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 SQLEQ14534 574 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 TTC7BQ86TV6 843 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 C8orf59Q8N0T1 100 aaPredicted RBP13.58□□□□□ -0.24
SNED1-205ENST00000405547 TMCO1Q9UM00 188 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 KLHL20Q9Y2M5 609 aa13.58□□□□□ -0.24
SNED1-205ENST00000405547 LINC00854A0A1B0GVQ3 168 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 CCDC130P13994 396 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 PPP4R4Q6NUP7 873 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 CES3Q6UWW8 571 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 FGD2Q7Z6J4 655 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 CYP4Z2PQ8N1L4 340 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 CEP41Q9BYV8 373 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 SAE1Q9UBE0 346 aaPredicted RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 C3P01024 1663 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 PDE9AO76083 593 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 MARCKSL1P49006 195 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 TAF1CQ15572 869 aaPredicted RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 HYIQ5T013 277 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 C16orf46Q6P387 395 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 FBXW8Q8N3Y1 598 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 OLFM1Q99784 485 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 TLR8Q9NR97 1041 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 H3BRB1 525 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 FSCN2O14926 492 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 TAB1Q15750 504 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 PIWIL4Q7Z3Z4 852 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms