RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TBC1D3KA0A087X1G2 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3BA6NDS4 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3FA6NER0 549 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3LB9A6J9 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 PRYO14603 147 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 NPHP1O15259 732 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 NUDT3O95989 172 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3HP0C7X1 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 CKMT1AP12532 417 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 NDUFS1P28331 727 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 STAT6P42226 847 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 VPS41P49754 854 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 RBM6P78332 1123 aaKnown RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 KPNB1Q14974 876 aaKnown RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 CNGA3Q16281 694 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 ADCK5Q3MIX3 580 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 ANKRD45Q5TZF3 282 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3GQ6DHY5 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 DGAT2L7PQ6IED9 249 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3CQ6IPX1 549 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 KIAA1324Q6UXG2 1013 aaKnown RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 CYP26C1Q6V0L0 522 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 RASGRP2Q7LDG7 609 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TBC1D3Q8IZP1 549 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 BOLLQ8N9W6 283 aaKnown RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 PNLDC1Q8NA58 520 aaKnown RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 ADAMTS18Q8TE60 1221 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 EVI5LQ96CN4 794 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 UBXN10Q96LJ8 280 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 R3HDMLQ9H3Y0 253 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 G6PC2Q9NQR9 355 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 GAR1Q9NY12 217 aaKnown RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 B3GNT3Q9Y2A9 372 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 HEMK1Q9Y5R4 338 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 MON2Q7Z3U7 1717 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 ADGRL3Q9HAR2 1447 aa5.57□□□□□ -1.52
HMGB3P19-201ENST00000403971 TK1P04183 234 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 BMP5P22003 454 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 CDK7P50613 346 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 PROK1P58294 105 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 ACTR2P61160 394 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 TFF2Q03403 129 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 SMAD1Q15797 465 aaKnown RBP5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 PROSER3Q2NL68 480 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 PRAMEF17Q5VTA0 474 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 WDR93Q6P2C0 686 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 FBXO42Q6P3S6 717 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 COG8Q96MW5 612 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 GPR78Q96P69 363 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 FYTTD1Q96QD9 318 aaKnown RBP5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 TWSG1Q9GZX9 223 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 RIOX1Q9H6W3 641 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 RMI1Q9H9A7 625 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 ASNSD1Q9NWL6 643 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 DCCP43146 1447 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 ANKARQ7Z5J8 1434 aa5.56□□□□□ -1.52
HMGB3P19-201ENST00000403971 ANKRD26Q9UPS8 1709 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 TISP43B9A030 160 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 BTBD19C9JJ37 291 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 POC1B-GALNT4F8VUJ3 575 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 CYP3A4P08684 503 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 SFPQP23246 707 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 CNTFP26441 200 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 SLC8A1P32418 973 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 RBM5P52756 815 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 RCAN1P53805 252 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 TLE3Q04726 772 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 DDX10Q13206 875 aaKnown RBP5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 SEC23BQ15437 767 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 HSP90AB4PQ58FF6 505 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 CC2D1BQ5T0F9 858 aaKnown RBP5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 FCRLBQ6BAA4 426 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 SUMO4Q6EEV6 95 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 RANBP10Q6VN20 620 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 LAS2Q8IYD9 372 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 GALNT4Q8N4A0 578 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 CEP70Q8NHQ1 597 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 HIC2Q96JB3 615 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 PYM1Q9BRP8 204 aaKnown RBP5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 CDK19Q9BWU1 502 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 PLEKHA2Q9HB19 425 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 ATP7BP35670 1465 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 KIF20BQ96Q89 1820 aa5.55□□□□□ -1.52
HMGB3P19-201ENST00000403971 LRRC7Q96NW7 1537 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 SPATA31A1Q5TZJ5 1347 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 KIF1AQ12756 1690 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 MBD3L5A6NJ08 208 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 STX16-NPEPL1H3BU86 382 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 STX16O14662 325 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 RRHO14718 337 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 PYGLP06737 847 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 SLC3A2P08195 630 aaKnown RBP5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 HOXD12P35452 270 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 SLC37A1P57057 533 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 SHC2P98077 582 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 DCTN1Q14203 1278 aa5.54□□□□□ -1.52
HMGB3P19-201ENST00000403971 TAF12Q16514 161 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms